Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.128 chr2 + View
Actinidia chinensis Actinidia16840 Lachesis_group12 - View
Actinidia chinensis Actinidia35537 Lachesis_group2 - View
Amaranthus hybridus Ah.06g189100 AmaHy_arrow1_Scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X25DG1 KOG4430 - Topoisomerase I-binding arginine-serine-rich protein arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PTHF6B PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT3G05670 RING/U-box protein RING/U-box protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1)%3B Has 32410 Blast hits to 21304 proteins in 1066 species: Archae - 126%3B Bacteria - 4266%3B Metazoa - 11275%3B Fungi - 4969%3B Plants - 2419%3B Viruses - 550%3B Other Eukaryotes - 8805 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0706G010 AmTr_v1.0_scaffold00057 + View
Brassica carinata BcaC05g29788 ChrC05 - View
Brassica oleracea BolC3t16446H C3 + View
Brassica rapa BraA05t22950Z A05 - View
Beta vulgaris EL10Ac4g09839 PF00628 - PHD-finger (PHD) Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0036923 unnamed protein product [Coffea canephora] Chr6 - View
Camellia sinensis var. sinensis CSS0041567 unnamed protein product [Coffea canephora] Chr3 - View
Capsicum annuum CAN.G1273.19 PGAv.1.6.scaffold1273 - View
Cannabis sativa CANSAT54G2942 NC_044375.1 - View
Cicer arietinum L. Ca_09324_v3 Ca_LG3_v3 - View
Coffea canephora Cc02_g34580 Putative RING/U-box protein chr2 + View
Citrus clementina Ciclev10000286m.g scaffold_5 + View
Carpinus fangiana Cfa006676 Cfa02 + View
Cardamine hirsuta CARHR080110 PHD and RING finger domain-containing protein Chr3 + View
Carya illinoinensis CiPaw.07G026000 PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) Chr07 + View
Carya illinoinensis CiPaw.08G158100 PTHR22937//PTHR22937:SF39 - RING FINGER CONTAINING PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Chr08 - View
Citrullus lanatus ClCG03G017550 PHD and RING finger domain-containing protein CG_Chr03 - View
Cucumis melo MELO3C015274.2 PHD and RING finger domain-containing 1 chr02 + View
Chenopodium quinoa AUR62000702 Phrf1: PHD and RING finger domain-containing protein 1 C_Quinoa_Scaffold_2088 + View
Chenopodium quinoa AUR62005253 Phrf1: PHD and RING finger domain-containing protein 1 C_Quinoa_Scaffold_3820 + View
Capsella rubella Carub.0003s0499 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_1G038480 PHD and RING finger domain-containing protein chr1 + View
Daucus carota DCAR_005407 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv24414 GWHABJS00000005 - View
Davidia involucrata Dinv30857 GWHABJS00000002 + View
Durio zibethinus Duzib177G0806 NW_019168004.1 + View
Durio zibethinus Duzib106G1156 NW_019168492.1 - View
Durio zibethinus Duzib128G0304 NW_019168481.1 - View
Erigeron canadensis ECA236G2114 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.H03278 Chr08 + View
Erythranthe guttata Migut.B00983 scaffold_2 + View
Fragaria x ananassa FAN05G2011 PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) Fvb6-3 - View
Fragaria x ananassa FAN02G3774 PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) Fvb6-4 + View
Fragaria x ananassa FAN09G2847 PF00628 - PHD-finger (PHD) Fvb6-2 - View
Fragaria x ananassa FAN14G2831 PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) Fvb6-1 - View
Fragaria vesca FvH4_6g07080 PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) Fvb6 + View
Gossypium hirsutum Gohir.A13G111200 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED A13 + View
Gossypium hirsutum Gohir.A11G271100 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED A11 + View
Gossypium hirsutum Gohir.D13G113700 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED D13 + View
Gossypium hirsutum Gohir.D13G180700 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED D13 + View
Gossypium hirsutum Gohir.D11G281300 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED D11 + View
Gossypium hirsutum Gohir.A13G174880 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED A13 + View
Glycine max Glyma.10G149400 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Gm10 - View
Glycine max Glyma.20G238800 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Gm20 + View
Gossypium raimondii Gorai.013G206200 Chr13 + View
Gossypium raimondii Gorai.007G303700 Chr07 + View
Gossypium raimondii Gorai.013G127600 Chr13 + View
Helianthus annuus HanXRQChr15g0466321 Putative zinc finger, PHD-type; Zinc finger, RING/FYVE/PHD-type HanXRQChr15 - View
Lupinus albus Lalb_Chr18g0045961 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Lalb_Chr18 + View
Lupinus albus Lalb_Chr06g0167561 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Lalb_Chr06 - View
Lupinus albus Lalb_Chr15g0077561 Lalb_Chr15 + View
Lotus japonicus Lj5g0008592 PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) chr5 - View
Lotus japonicus Lj1g0017235 PTHR22937//PTHR22937:SF39 - RING FINGER CONTAINING PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED chr1 - View
Lonicera japonica Lj5A342T76 GWHAAZE00000005 - View
Lonicera japonica Lj9A204T41 GWHAAZE00000009 + View
Magnolia biondii MBI18_g05915_MAGBIO AED:0.03 Chr18 + View
Malus domestica MD12G1209300 RING/U-box protein Chr12 - View
Malus domestica MD04G1196300 RING/U-box protein Chr04 - View
Manihot esculenta Manes.08G113500 Chromosome08 - View
Medicago truncatula Medtr7g112410 poxvirus Ag35 surface protein chr7 - View
Nelumbo nucifera Nn4g25695 chr4 - View
Olea europaea Oeu012139.1 chr13 + View
Oryza sativa ssp. japonica Os03g0302200 E3 ligase, Regulation of response to heat stress chr03 + View
Petunia axillaris Peaxi162Scf00073g00011 RING/U-box protein Peaxi162Scf00073 + View
Punica granatum PGR031G0203 NC_045127.1 - View
Prunus persica Prupe.6G316500 Pp06 - View
Pisum sativum Psat3g013760 PHD-finger chr3LG5 + View
Papaver somniferum PSO357G0121 NW_020622934.1 - View
Papaver somniferum PSO170G2184 NC_039360.1 + View
Populus trichocarpa Potri.005G021000 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Chr05 - View
Populus trichocarpa Potri.013G011400 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Chr13 - View
Phaseolus vulgaris Phvul.007G199500 Chr07 + View
Quercus lobata QL03p017951 3 + View
Rosa chinensis RcHm_v2.0_Chr3g0456661 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim11G0092600 chr11 + View
Striga asiatica SGA_v2.0_scaffold4G01966 scaffold4 - View
Salix brachista Sabra13G0010000 GWHAAZH00000013 - View
Salix brachista Sabra05G0027000 GWHAAZH00000005 - View
Simmondsia chinensis Sc09g0002790 GWHAASQ00000009 - View
Simmondsia chinensis Sc16g0008850 GWHAASQ00000016 + View
Sechium edule Sed0013561 LG04 + View
Sechium edule Sed0009501 LG04 - View
Solanum lycopersicum Solyc01g100130.3 Zinc finger protein (AHRD V3.3 *-* A0A200PWL1_9MAGN) SL4.0ch01 + View
Schrenkiella parvula Sp3g04540 PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED ch3-1 + View
Solanum pennellii Sopen01g043640 RING/U-box protein | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, PHD-type , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400024731 Splicing factor, arginine/serine-rich 2,rnap interacting protein ST4.03ch01 + View
Selenicereus undatus Hund21731 Scaffold_33680 + View
Selenicereus undatus Hund07125 Scaffold_33676 + View
Trochodendron aralioides TAR633G0751 group2 + View
Trochodendron aralioides TAR365G0619 group16 - View
Theobroma cacao Thecc.05G319200 RING/U-box protein Chromosome_5 + View
Tarenaya hassleriana THA.LOC104802783 tyrosine-protein kinase BAZ1B NW_010970490.1 - View
Trifolium pratense TPR.G1632 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI12G0598 NC_052243.1 + View
Tripterygium wilfordii TWI56G0232 NC_052242.1 - View
Vaccinium macrocarpon vmacro01538 Protein of unknown function chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0572 CM024071.1 - View
Vitis vinifera GSVIVG01031198001 chr14 - View
Zea mays Zm00001eb396440 Zm00001e038362 RING/U-box protein 9 - View