Gene: AT3G05670

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05670
  • Transcript Identifier AT3G05670.1
  • Gene Type Coding gene
  • Location Chr3 : 1653888-1657022 : positive

Gene Family Information

  • ID HOM05D002798
  • #Genes/#Species 247/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05670.1
  • uniprot Q9M9X2

Descriptions

  • Description RING/U-box protein
  • Computational description RING/U-box protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 32410 Blast hits to 21304 proteins in 1066 species: Archae - 126; Bacteria - 4266; Metazoa - 11275; Fungi - 4969; Plants - 2419; Viruses - 550; Other Eukaryotes - 8805 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR019787 Zinc finger, PHD-finger
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated