Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G1910 LG-4 + View
Arabidopsis lyrata AL2G39550 scaffold_2 - View
Arabidopsis thaliana AT1G79090 topoisomerase II-associated protein Encodes a component of the mRNA decapping machinery that is found in complexes with and is phosphorylated by MPK4. The protein can be found in P-bodies after treatment with PAMPs. Pat1 mutants exhibit dwarfism and de-repressed immunity dependent on the immune receptor SUMM2. The pat1 constitutive defense phenotype is suppressed by summ2 such that pat1 summ2 mutants display a wild-type phenotype in response to biotrophic and necrotrophic pathogens. FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167)%3B BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g45383 ChrC08 + View
Brassica carinata BcaB02g07196 ChrB02 - View
Brassica carinata BcaC08g47473 ChrC08 - View
Brassica napus C06p30150 C06 + View
Brassica napus C06p52960 C06 - View
Brassica napus A07p44230 A07 - View
Brassica oleracea BolC6t38177H C6 + View
Brassica oleracea BolC6t40314H C6 - View
Brassica rapa BraA07t31931Z A07 - View
Camellia sinensis var. sinensis CSS0031562 PREDICTED: uncharacterized protein LOC100267869 isoform X1 [Vitis vinifera] Chr7 + View
Camellia sinensis var. sinensis CSS0017391 PREDICTED: uncharacterized protein LOC100267869 isoform X1 [Vitis vinifera] Chr5 - View
Corylus avellana Haze_08557 Similar to PAT1: Protein PAT1 homolog (Arabidopsis thaliana OX%3D3702) 4 + View
Capsella rubella Carub.0002s2596 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) scaffold_2 - View
Daucus carota DCAR_009637 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv19622 GWHABJS00000001 - View
Durio zibethinus Duzib213G0170 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon NW_019167993.1 + View
Erigeron canadensis ECA236G3663 Conyza_canadensis_scaffold:3 - View
Eutrema salsugineum Thhalv10018148m.g PF09770 - Topoisomerase II-associated protein PAT1 (PAT1) scaffold_9 + View
Fragaria x ananassa FAN16G1614 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) Fvb3-3 + View
Fragaria x ananassa FAN11G3376 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) Fvb3-4 - View
Gossypium hirsutum Gohir.A01G038600 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) A01 - View
Glycine max Glyma.15G255100 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) Gm15 - View
Gossypium raimondii Gorai.002G035500 Chr02 - View
Lupinus albus Lalb_Chr25g0284991 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) Lalb_Chr25 + View
Lotus japonicus Lj3g0024248 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) chr3 - View
Lactuca sativa Lsat_1_v5_gn_7_112280 KOG3227 - Calcium-responsive transcription coactivator Lsat_1_v8_lg_7 + View
Malus domestica MD05G1219500 Protein of unknown function Chr05 - View
Manihot esculenta Manes.14G015900 Chromosome14 + View
Manihot esculenta Manes.06G171300 Chromosome06 - View
Prunus persica Prupe.4G140400 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) Pp04 + View
Pisum sativum Psat1g010880 Transferase activity + transferring phosphorus-containing groups chr1LG6 + View
Phaseolus vulgaris Phvul.005G056500 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) Chr05 - View
Phaseolus vulgaris Phvul.011G174900 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) Chr11 + View
Schrenkiella parvula Sp5g34140 K12617 - DNA topoisomerase 2-associated protein PAT1 (PATL1, PAT1) ch5-7 - View