Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G3660 LG-9 - View
Aethionema arabicum Aa31LG10G8640 LG-10 - View
Aethionema arabicum Aa31LG8G10440 LG-8 - View
Acer truncatum Atru.chr4.1581 chr4 - View
Arabidopsis lyrata AL7G42640 scaffold_7 - View
Avicennia marina MSTRG.4244 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.9799 ScioBoG_12795_HRSCAF_12848 - View
Amaranthus hybridus Ah.04g149360 Glycine-rich RNA-binding protein 2, mitochondrial (AtGR-RBP2) (AtRBG2) (Glycine-rich protein 2) (AtGRP2) (Mitochondrial RNA-binding protein 1a) (At-mRBP1a) AmaHy_arrow1_Scaffold_4 + View
Amaranthus hybridus Ah.13g077970 AmaHy_arrow1_Scaffold_13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F01EC9 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JG8SFN PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT3G23830 glycine-rich RNA-binding protein 4 encodes a glycine-rich RNA binding protein. Gene expression is induced by cold and reduced by ionic (salt) and non-ionic (mannitol) osmotic stress. Lines overexpressing the gene are slightly more tolerant to osmotic stress during germination. glycine-rich RNA-binding protein 4 (GRP4)%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 2 (TAIR:AT4G13850.3)%3B Has 39778 Blast hits to 39772 proteins in 2962 species: Archae - 777%3B Bacteria - 23781%3B Metazoa - 723%3B Fungi - 392%3B Plants - 1153%3B Viruses - 36%3B Other Eukaryotes - 12916 (source: NCBI BLink). glycine-rich RNA-binding protein 4 (GRP4)%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 2 (TAIR:AT4G13850.3)%3B Has 79 Blast hits to 79 proteins in 22 species: Archae - 3%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 72%3B Viruses - 1%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT4G13850 glycine-rich RNA-binding protein 2 Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold. glycine-rich RNA-binding protein 2 (GR-RBP2)%3B FUNCTIONS IN: double-stranded DNA binding%2C RNA binding%2C single-stranded DNA binding%2C copper ion binding%2C ATP binding%3B INVOLVED IN: response to cold%2C seed germination%2C response to osmotic stress%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2)%3B Has 1220 Blast hits to 1220 proteins in 72 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 4%3B Plants - 1216%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB02g08647 ChrB02 - View
Brassica napus C08p07600 C08 - View
Beta vulgaris EL10Ac3g07457 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0023580 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Nelumbo nucifera] Chr5 - View
Camellia sinensis var. sinensis CSS0047850 glycine-rich RNA-binding protein, putative [Ricinus communis] Chr9 + View
Cicer arietinum L. Ca_16401_v3 Ca_LG5_v3 + View
Corylus avellana Haze_11650 Similar to RBG2: Glycine-rich RNA-binding protein 2, mitochondrial (Arabidopsis thaliana OX%3D3702) 9 + View
Citrus clementina Ciclev10006159m.g scaffold_9 + View
Cardamine hirsuta CARHR099830 RNA binding protein-like protein Chr3 - View
Cardamine hirsuta CARHR219760 RNA binding protein Chr7 + View
Carya illinoinensis CiPaw.01G117200 KOG0114 - Predicted RNA-binding protein (RRM superfamily) Chr01 - View
Carica papaya Cpa.g.sc157.51 supercontig_157 - View
Chenopodium quinoa AUR62020856 PSRP2: 30S ribosomal protein 2, chloroplastic C_Quinoa_Scaffold_4257 - View
Chenopodium quinoa AUR62018559 RBG2: Glycine-rich RNA-binding protein 2, mitochondrial C_Quinoa_Scaffold_4077 - View
Capsella rubella Carub.0003s2414 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) scaffold_3 - View
Capsella rubella Carub.0007s2859 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) scaffold_7 - View
Daucus carota DCAR_026644 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv27201 GWHABJS00000014 + View
Davidia involucrata Dinv38176 GWHABJS00000016 + View
Durio zibethinus Duzib151G0909 NW_019167904.1 - View
Durio zibethinus Duzib212G0978 NW_019168026.1 - View
Erigeron canadensis ECA238G3466 Conyza_canadensis_scaffold:6 + View
Erythranthe guttata Migut.G00758 scaffold_7 + View
Erythranthe guttata Migut.N00419 scaffold_14 + View
Eutrema salsugineum Thhalv10002711m.g PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) scaffold_4 + View
Fragaria x ananassa FAN22G0533 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4-1 - View
Fragaria x ananassa FAN12G3631 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4-3 - View
Fragaria x ananassa FAN07G2612 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4-4 + View
Fragaria x ananassa FAN17G2848 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4-2 + View
Fragaria vesca FvH4_4g13330 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4 - View
Gossypium hirsutum Gohir.D02G022700 KOG0114 - Predicted RNA-binding protein (RRM superfamily) D02 - View
Gossypium hirsutum Gohir.A10G127800 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A10 - View
Gossypium hirsutum Gohir.A02G019400 KOG0114 - Predicted RNA-binding protein (RRM superfamily) A02 - View
Glycine max Glyma.18G002000 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Gm18 + View
Glycine max Glyma.11G255000 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Gm11 - View
Gossypium raimondii Gorai.005G028100 Chr05 - View
Helianthus annuus HanXRQChr07g0185611 Probable glycine-rich RNA-binding protein 4 HanXRQChr07 - View
Lupinus albus Lalb_Chr23g0278341 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Lalb_Chr23 - View
Lonicera japonica Lj6A382T18 GWHAAZE00000006 - View
Manihot esculenta Manes.15G056500 Chromosome15 + View
Manihot esculenta Manes.03G144500 Chromosome03 - View
Medicago truncatula Medtr3g084040 RNA-binding (RRM/RBD/RNP motif) family protein chr3 + View
Nicotiana tabacum Nitab4.5_0002260g0090 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait Nitab4.5_0002260 - View
Petunia axillaris Peaxi162Scf00047g00132 glycine-rich RNA-binding protein 2 Peaxi162Scf00047 - View
Punica granatum PGR142G2815 NC_045128.1 - View
Prunus persica Prupe.1G164600 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Pp01 + View
Populus trichocarpa Potri.017G059000 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr17 + View
Populus trichocarpa Potri.001G319800 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr01 + View
Phaseolus vulgaris Phvul.001G267100 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr01 - View
Quercus lobata QL06p026090 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0413641 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim02G0061700 chr02 + View
Rhododendron simsii Rhsim09G0060000 chr09 + View
Salvia bowleyana SalBow3G1705 GWHASIU00000006 - View
Salix brachista Sabra17G0052400 GWHAAZH00000017 + View
Salix brachista Sabra16G0202500 GWHAAZH00000016 + View
Simmondsia chinensis Sc13g0000400 GWHAASQ00000013 + View
Solanum lycopersicum Solyc05g053780.4 RNA binding protein (AHRD V3.3 *** O23793_NICSY) SL4.0ch05 + View
Solanum lycopersicum Solyc09g092320.3 RNA binding protein (AHRD V3.3 *** O23793_NICSY) SL4.0ch09 + View
Schrenkiella parvula Sp3g21550 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) ch3-2 - View
Schrenkiella parvula Sp7g11680 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) ch7-4 + View
Solanum pennellii Sopen09g035220 Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold. | GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2) | FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding | INVOLVED IN: response to cold, seed germination, response to osmotic stress | LOCATED IN: mitochondrion | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 Spenn-ch09 + View
Solanum pennellii Sopen05g032250 Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold. | GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2) | FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding | INVOLVED IN: response to cold, seed germination, response to osmotic stress | LOCATED IN: mitochondrion | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400020576 RNA binding protein ST4.03ch09 + View
Solanum tuberosum PGSC0003DMG400015754 RNA binding protein ST4.03ch05 + View
Selenicereus undatus Hund24411 Scaffold_3410 + View
Selenicereus undatus Hund19004 Scaffold_33673 - View
Trochodendron aralioides TAR633G0711 group2 - View
Trochodendron aralioides TAR362G1249 group17 - View
Theobroma cacao Thecc.04G195500 Glycine-rich RNA-binding protein 4 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104808697 glycine-rich RNA-binding protein 2%2C mitochondrial NW_010964923.1 - View
Vaccinium macrocarpon vmacro15565 Similar to RBG4: Glycine-rich RNA-binding protein 4, mitochondrial (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro00439 Similar to RBG2: Glycine-rich RNA-binding protein 2, mitochondrial (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01021024001 chr5 - View