Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Dinv43216 GWHABJS00000085 - View
Dinv42884 GWHABJS00000085 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G13870 LG-3 + View
Acer truncatum Atru.chr7.134 chr7 + View
Actinidia chinensis Actinidia04285 Lachesis_group1 - View
Actinidia chinensis Actinidia38679 Lachesis_group8 + View
Actinidia chinensis Actinidia23546 Lachesis_group25 + View
Actinidia chinensis Actinidia38340 Lachesis_group15 - View
Arabidopsis lyrata AL8G34140 scaffold_8 + View
Aquilegia oxysepala Aqoxy7G03464 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MXR4WM PF05182 - Fip1 motif (Fip1) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT5G58040 FIP1 -like protein Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally %2C it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA. homolog of yeast FIP1 [V] (FIP1[V])%3B FUNCTIONS IN: protein binding%2C RNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Fip1 (InterPro:IPR007854)%3B BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein (TAIR:AT3G66652.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0739G197 AmTr_v1.0_scaffold00065 - View
Brassica carinata BcaB08g36155 ChrB08 - View
Brassica carinata BcaC04g19912 ChrC04 - View
Brassica napus C09p49960 C09 + View
Brassica napus A10p16130 A10 - View
Brassica oleracea BolC3t13903H C3 - View
Brassica oleracea BolC9t57849H C9 + View
Brassica rapa BraA03t10557Z A03 - View
Brassica rapa BraA10t43616Z A10 + View
Beta vulgaris EL10Ac8g18849 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Chr8_EL10_PGA_scaffold4 - View
Camellia sinensis var. sinensis CSS0041477 PREDICTED: FIP1[V]-like protein [Vitis vinifera] Chr6 - View
Corylus avellana Haze_19235 Similar to FIPS5: FIP1 -like protein (Arabidopsis thaliana OX%3D3702) 7 + View
Citrus clementina Ciclev10007258m.g scaffold_1 - View
Ceratophyllum demersum CDE05G1362 3 + View
Carpinus fangiana Cfa020847 Cfa08 + View
Cardamine hirsuta CARHR271850 FIP1 -like protein Chr8 + View
Carya illinoinensis CiPaw.15G174200 PF05182 - Fip1 motif (Fip1) Chr15 - View
Carya illinoinensis CiPaw.16G114900 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Chr16 + View
Citrullus lanatus ClCG06G012240 Pre-mRNA 3'-end-processing factor FIP1 CG_Chr06 - View
Cucumis melo MELO3C010242.2 FIP1 chr02 + View
Corchorus olitorius COL.COLO4_18776 Pre-mRNA polyadenylation factor Fip1 AWUE01016503.1 - View
Carica papaya Cpa.g.sc46.127 supercontig_46 + View
Capsella rubella Carub.0008s1859 KOG1049 - Polyadenylation factor I complex, subunit FIP1 scaffold_8 + View
Cucumis sativus L. CsaV3_1G028740 FIP1 chr1 - View
Durio zibethinus Duzib168G2294 NW_019168159.1 + View
Durio zibethinus Duzib187G1590 NW_019167860.1 - View
Erigeron canadensis ECA234G1613 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.C00363 Chr03 + View
Erythranthe guttata Migut.J01330 scaffold_10 - View
Eutrema salsugineum Thhalv10012479m.g KOG1049 - Polyadenylation factor I complex, subunit FIP1 scaffold_2 - View
Fragaria x ananassa FAN23G1864 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Fvb1-3 + View
Fragaria x ananassa FAN28G2365 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Fvb1-1 - View
Fragaria x ananassa FAN26G3236 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Fvb1-2 - View
Fragaria x ananassa FAN19G1766 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Fvb1-4 - View
Fragaria vesca FvH4_1g01180 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Fvb1 + View
Gossypium hirsutum Gohir.D13G191400 PF05182 - Fip1 motif (Fip1) D13 + View
Gossypium hirsutum Gohir.A05G051500 KOG1049 - Polyadenylation factor I complex, subunit FIP1 A05 - View
Gossypium hirsutum Gohir.D05G053000 KOG1049 - Polyadenylation factor I complex, subunit FIP1 D05 - View
Gossypium hirsutum Gohir.D07G030200 PF05182 - Fip1 motif (Fip1) D07 - View
Gossypium hirsutum Gohir.A07G026300 PF05182 - Fip1 motif (Fip1) A07 - View
Gossypium hirsutum Gohir.A13G184900 PF05182 - Fip1 motif (Fip1) A13 + View
Glycine max Glyma.15G205600 PF05182 - Fip1 motif (Fip1) Gm15 - View
Gossypium raimondii Gorai.013G217400 Chr13 + View
Gossypium raimondii Gorai.001G031400 Chr01 - View
Gossypium raimondii Gorai.009G054800 Chr09 - View
Helianthus annuus HanXRQChr10g0314671 Putative pre-mRNA polyadenylation factor Fip1 HanXRQChr10 - View
Hydrangea macrophylla Hma1.2p1_0222F.1_g093310 Hma1.2p1_0222F.1 - View
Lupinus albus Lalb_Chr08g0233951 PF05182 - Fip1 motif (Fip1) Lalb_Chr08 - View
Lupinus albus Lalb_Chr13g0300951 PF05182 - Fip1 motif (Fip1) Lalb_Chr13 + View
Lotus japonicus Lj6g0022686 PF05182 - Fip1 motif (Fip1) chr6 - View
Lonicera japonica Lj9C714G7 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_5_91481 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI15_g10629_MAGBIO AED:0.12 Chr15 - View
Malus domestica MD02G1009900 homolog of yeast FIP1 Chr02 + View
Manihot esculenta Manes.14G111700 Chromosome14 - View
Manihot esculenta Manes.06G037900 Chromosome06 + View
Nelumbo nucifera Nn8g39802 chr8 - View
Olea europaea Oeu050477.1 scaffold568 + View
Petunia axillaris Peaxi162Scf00347g00821 FIP1, putative isoform 1 Peaxi162Scf00347 - View
Punica granatum PGR102G2779 NC_045129.1 - View
Prunus persica Prupe.7G260100 Pp07 - View
Papaver somniferum PSO170G5719 NC_039360.1 - View
Papaver somniferum PSO017G3118 NC_039362.1 + View
Populus trichocarpa Potri.006G187400 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Chr06 + View
Populus trichocarpa Potri.018G110100 KOG1049 - Polyadenylation factor I complex, subunit FIP1 Chr18 + View
Phaseolus vulgaris Phvul.009G194000 PF05182 - Fip1 motif (Fip1) Chr09 + View
Phaseolus vulgaris Phvul.003G157600 PF05182 - Fip1 motif (Fip1) Chr03 + View
Quercus lobata QL02p092676 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0085981 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim03G0256100 chr03 - View
Rhododendron simsii Rhsim01G0045400 chr01 - View
Striga asiatica SGA_v2.0_scaffold206G41814 scaffold206 + View
Salvia bowleyana SalBow1G6151 GWHASIU00000001 + View
Salix brachista Sabra18G0093100 GWHAAZH00000018 + View
Salix brachista Sabra06G0142300 GWHAAZH00000006 + View
Simmondsia chinensis Sc08g0004970 GWHAASQ00000008 + View
Sechium edule Sed0010991 LG08 + View
Sechium edule Sed0025790 LG12 + View
Solanum lycopersicum Solyc07g005320.3 FIP1 (AHRD V3.3 *** A0A2G2WAR6_CAPBA) SL4.0ch07 - View
Schrenkiella parvula Sp6g19720 KOG1049 - Polyadenylation factor I complex, subunit FIP1 ch6-6 + View
Solanum pennellii Sopen07g001470 Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA. | homolog of yeast FIP1 (V) (FIP1(V)) | FUNCTIONS IN: protein binding, RNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Fip1 | BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400003182 ATP binding protein ST4.03ch07 - View
Trochodendron aralioides TAR625G1002 group4 + View
Theobroma cacao Thecc.09G033700 FIP1 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104817824 FIP1[V]-like protein NW_010966021.1 + View
Tripterygium wilfordii TWI34G0110 NC_052235.1 + View
Tripterygium wilfordii TWI63G1714 NC_052240.1 + View
Vaccinium macrocarpon vmacro06092 Similar to FIPS5: FIP1 -like protein (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0704 CM024074.1 - View
Vitis vinifera GSVIVG01023597001 chr11 + View