Gene: Sopen07g001470

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g001470
  • Transcript Identifier Sopen07g001470.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 459589-471739 : positive

Gene Family Information

  • ID HOM05D003779
  • #Genes/#Species 183/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g001470.1

Descriptions

  • Description Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA. | homolog of yeast FIP1 (V) (FIP1(V)) | FUNCTIONS IN: protein binding, RNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Fip1 | BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G58040
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G58040
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G58040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044976 FIPS3/FIPS5-like
IPR007854 Pre-mRNA polyadenylation factor Fip1 domain
Mapman id Description
16.3.1.2.6 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.component Fip1