Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Dinv32567 GWHABJS00000020 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.642 chr5 - View
Actinidia chinensis Actinidia20228 Lachesis_group6 + View
Arabidopsis lyrata AL1G11082 scaffold_1 - View
Avicennia marina MSTRG.28251 ScioBoG_94932_HRSCAF_95134 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KL1Z6U PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TEE0AU PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT1G01370 Histone superfamily protein Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells. HTR12%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: double fertilization forming a zygote and endosperm%3B LOCATED IN: chromosome%2C centromeric region%2C nucleus%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1)%3B Has 14361 Blast hits to 14354 proteins in 7190 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 10494%3B Fungi - 2020%3B Plants - 1256%3B Viruses - 0%3B Other Eukaryotes - 591 (source: NCBI BLink). Chr1 + View
Camellia sinensis var. sinensis CSS0029594 PREDICTED: histone H3-like centromeric protein HTR12 [Solanum lycopersicum] Chr6 + View
Capsicum annuum CAN.G986.29 PGAv.1.6.scaffold986 + View
Corylus avellana Haze_15632 Similar to HTR12: Histone H3-like centromeric protein HTR12 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g39140 Histone H3-like centromeric protein HTR12 chr2 - View
Carpinus fangiana Cfa003821 Cfa01 + View
Cardamine hirsuta CARHR001070 Histone H3 like protein Chr1 - View
Carya illinoinensis CiPaw.01G074200 PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A Chr01 - View
Cucumis melo MELO3C028752.2 Histone H3 chr01 - View
Corchorus olitorius COL.COLO4_06309 histone H3 AWUE01012662.1 + View
Capsella rubella Carub.0001s0086 scaffold_1 - View
Cucumis sativus L. CsaV3_7G025320 Histone H3 like protein chr7 + View
Daucus carota DCAR_025246 hypothetical protein DCARv2_Chr7 + View
Durio zibethinus Duzib268G1884 NW_019168270.1 + View
Erythranthe guttata Migut.N01557 scaffold_14 + View
Eutrema salsugineum Thhalv10008889m.g PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A scaffold_5 + View
Fragaria x ananassa FAN06G4844 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A Fvb7-2 - View
Fragaria x ananassa FAN06G2471 PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A Fvb7-2 - View
Fragaria x ananassa FAN10G2992 PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A Fvb7-1 + View
Fragaria x ananassa FAN01G1464 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A Fvb7-4 + View
Fragaria x ananassa FAN10G0982 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A Fvb7-1 + View
Fragaria x ananassa FAN03G0085 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A Fvb7-3 + View
Fragaria vesca FvH4_7g16180 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A Fvb7 - View
Gossypium hirsutum Gohir.D07G143700 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A D07 + View
Gossypium hirsutum Gohir.A07G138600 PTHR11426//PTHR11426:SF46//PTHR11426:SF78 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A // SUBFAMILY NOT NAMED A07 + View
Glycine max Glyma.07G057300 PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A Gm07 + View
Glycine max Glyma.16G026300 PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A Gm16 + View
Gossypium raimondii Gorai.001G155600 Chr01 + View
Lupinus albus Lalb_Chr17g0342471 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A Lalb_Chr17 - View
Malus domestica MD07G1147400 Histone superfamily protein Chr07 - View
Malus domestica MD01G1078400 Histone superfamily protein Chr01 - View
Manihot esculenta Manes.05G024800 Chromosome05 + View
Medicago truncatula Medtr8g027840 core histone H2A/H2B/H3/H4 chr8 + View
Nelumbo nucifera Nn3g19053 chr3 + View
Nelumbo nucifera Nn1g01832 chr1 - View
Nicotiana tabacum Nitab4.5_0000838g0020 Histone core, Histone-fold, Histone H3 Nitab4.5_0000838 - View
Petunia axillaris Peaxi162Scf00786g00438 Histone superfamily protein Peaxi162Scf00786 + View
Punica granatum PGR042G1839 NC_045130.1 + View
Prunus persica Prupe.2G185400 Pp02 - View
Pisum sativum Psat4g160400 Core histone H2A/H2B/H3/H4 chr4LG4 - View
Papaver somniferum PSO384G1684 NC_039368.1 + View
Papaver somniferum PSO135G0036 NW_020631041.1 - View
Populus trichocarpa Potri.014G096400 PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A Chr14 - View
Phaseolus vulgaris Phvul.010G112000 PTHR11426:SF46 - HISTONE H3-LIKE CENTROMERIC PROTEIN A Chr10 - View
Quercus lobata QL04p056729 4 + View
Rosa chinensis RcHm_v2.0_Chr1g0359181 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim01G0171200 chr01 - View
Striga asiatica SGA_v2.0_scaffold4G02250 scaffold4 + View
Salvia bowleyana SalBow5G2634 GWHASIU00000003 - View
Salix brachista Sabra14G0071000 GWHAAZH00000014 + View
Sechium edule Sed0026278 LG09 - View
Sechium edule Sed0012474 LG09 + View
Solanum lycopersicum Solyc01g095650.4 Histone H3 (AHRD V3.3 *** A1BPL5_ARAHH) SL4.0ch01 - View
Schrenkiella parvula Sp1g00920 PTHR11426//PTHR11426:SF46 - HISTONE H3 // HISTONE H3-LIKE CENTROMERIC PROTEIN A ch1-1 - View
Solanum pennellii Sopen01g039400 Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells. | HTR12 | FUNCTIONS IN: DNA binding | INVOLVED IN: double fertilization forming a zygote and endosperm | LOCATED IN: chromosome, centromeric region, nucleus | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Histone H3 , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400000213 Histone H3 ST4.03ch01 - View
Trochodendron aralioides TAR375G0671 group15 - View
Theobroma cacao Thecc.01G345100 Histone superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104825875 histone H3-like centromeric protein HTR12 isoform X1 NW_010967707.1 - View
Tripterygium wilfordii TWI59G1211 NC_052248.1 - View
Vaccinium macrocarpon vmacro20859 Similar to HTR12: Histone H3-like centromeric protein HTR12 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13175 Similar to HTR12: Histone H3-like centromeric protein HTR12 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01027073001 chr15 + View