Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
DCAR_028963 hypothetical protein DCARv2_Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G15070 LG-7 + View
Acer truncatum Atru.chr5.3086 chr5 + View
Actinidia chinensis Actinidia27877 Lachesis_group16 + View
Actinidia chinensis Actinidia02233 Lachesis_group7 + View
Arabidopsis lyrata AL4G10630 scaffold_4 - View
Avicennia marina MSTRG.16829 ScioBoG_19743_HRSCAF_19834 + View
Amaranthus hybridus Ah.01g019080 AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy5G01532 CHR05 - View
Arabidopsis thaliana AT2G16390 SNF2 domain-containing protein / helicase domain-containing protein Putative chromatin remodeling protein%2C member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1)%3B FUNCTIONS IN: helicase activity%2C DNA binding%2C ATP binding%2C nucleic acid binding%3B INVOLVED IN: DNA methylation%2C production of siRNA involved in RNA interference%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: chromatin remodeling 34 (TAIR:AT2G21450.1)%3B Has 13448 Blast hits to 11886 proteins in 1506 species: Archae - 91%3B Bacteria - 3564%3B Metazoa - 3285%3B Fungi - 3284%3B Plants - 1229%3B Viruses - 105%3B Other Eukaryotes - 1890 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT2G21450 chromatin remodeling 34 chromatin remodeling 34 (CHR34)%3B FUNCTIONS IN: helicase activity%2C DNA binding%2C nucleic acid binding%2C ATP binding%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT2G16390.1)%3B Has 13841 Blast hits to 12186 proteins in 1498 species: Archae - 60%3B Bacteria - 3626%3B Metazoa - 3317%3B Fungi - 3335%3B Plants - 1269%3B Viruses - 195%3B Other Eukaryotes - 2039 (source: NCBI BLink). Chr2 - View
Beta vulgaris EL10Ac9g21686 PTHR10799//PTHR10799:SF611 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // CHROMATIN REMODELING PROTEIN-RELATED Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0026816 unnamed protein product [Coffea canephora] Chr3 - View
Corylus avellana Haze_02322 Similar to DRD1: Protein CHROMATIN REMODELING 35 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g17200 SNF2 domain-containing protein / helicase domain-containing protein chr2 - View
Citrus clementina Ciclev10027795m.g scaffold_8 + View
Cardamine hirsuta CARHR112360 DNA repair protein-like protein Chr4 + View
Carya illinoinensis CiPaw.05G070200 PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED Chr05 + View
Carya illinoinensis CiPaw.06G132300 PTHR10799//PTHR10799:SF611 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // CHROMATIN REMODELING PROTEIN-RELATED Chr06 - View
Citrullus lanatus ClCG11G004110 DNA repair protein-like protein CG_Chr11 - View
Chenopodium quinoa AUR62016777 Protein of unknown function C_Quinoa_Scaffold_3670 + View
Chenopodium quinoa AUR62011279 DRD1: Protein CHROMATIN REMODELING 35 C_Quinoa_Scaffold_3333 - View
Capsella rubella Carub.0004s0050 PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_2G015070 protein CHROMATIN REMODELING 35-like chr2 + View
Davidia involucrata Dinv23485 GWHABJS00000005 - View
Davidia involucrata Dinv42034 GWHABJS00000002 + View
Durio zibethinus Duzib248G0474 NW_019168048.1 + View
Durio zibethinus Duzib132G0897 NW_019167915.1 - View
Erigeron canadensis ECA234G1026 Conyza_canadensis_scaffold:4 + View
Erythranthe guttata Migut.B00205 scaffold_2 - View
Eutrema salsugineum Thhalv10022532m.g PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED scaffold_11 - View
Eutrema salsugineum Thhalv10000722m.g PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED scaffold_15 - View
Fragaria vesca FvH4_2g09760 PTHR10799//PTHR10799:SF611 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // CHROMATIN REMODELING PROTEIN-RELATED Fvb2 + View
Gossypium hirsutum Gohir.D12G030100 PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED D12 + View
Gossypium hirsutum Gohir.A13G032200 PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED A13 - View
Gossypium hirsutum Gohir.D13G030500 PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED D13 - View
Gossypium raimondii Gorai.008G031000 Chr08 + View
Gossypium raimondii Gorai.013G034700 Chr13 - View
Lonicera japonica Lj5A193T102 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_120421 PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_9_107821 Lsat_1_v8_lg_9 - View
Malus domestica MD05G1059900 SNF2 domain-containing protein / helicase domain-containing protein Chr05 - View
Malus domestica MD10G1068100 SNF2 domain-containing protein / helicase domain-containing protein Chr10 - View
Manihot esculenta Manes.04G086500 Chromosome04 - View
Manihot esculenta Manes.11G082500 Chromosome11 + View
Olea europaea Oeu041616.1 chr15 - View
Petunia axillaris Peaxi162Scf00016g00426 DNA repair and recombination protein RAD54-like Peaxi162Scf00016 - View
Punica granatum PGR042G0782 NC_045130.1 - View
Prunus persica Prupe.8G089900 Pp08 - View
Populus trichocarpa Potri.004G159000 K10875 - DNA repair and recombination protein RAD54 and RAD54-like protein (RAD54L, RAD54) Chr04 + View
Populus trichocarpa Potri.009G120700 K10875 - DNA repair and recombination protein RAD54 and RAD54-like protein (RAD54L, RAD54) Chr09 + View
Quercus lobata QL11p045293 11 + View
Rhododendron simsii Rhsim11G0180800 chr11 + View
Rhododendron simsii Rhsim05G0070700 chr05 - View
Striga asiatica SGA_v2.0_scaffold58G20498 scaffold58 - View
Salix brachista Sabra04G0106400 GWHAAZH00000004 + View
Salix brachista Sabra09G0093000 GWHAAZH00000009 + View
Sechium edule Sed0009304 LG01 - View
Solanum lycopersicum Solyc01g109970.3 SNF2 domain-containing protein / helicase domain-containing protein (AHRD V3.3 *** A0A178VR01_ARATH) SL4.0ch01 + View
Schrenkiella parvula Sp3g29660 PTHR10799//PTHR10799:SF611 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // CHROMATIN REMODELING PROTEIN-RELATED ch3-5 + View
Solanum pennellii Sopen01g052160 Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. | DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1) | FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding | INVOLVED IN: DNA methylation, production of siRNA involved in RNA interference | LOCATED IN: cellular_component unknown | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: chromatin remodeling 34 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400030952 Chromatin remodeling complex subunit ST4.03ch01 + View
Selenicereus undatus Hund06249 Scaffold_33676 - View
Trochodendron aralioides TAR381G0568 group11 - View
Trochodendron aralioides TAR625G0592 group4 - View
Theobroma cacao Thecc.02G079900 SNF2 domain-containing protein / helicase domain-containing protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104807870 protein CHROMATIN REMODELING 35-like NW_010963495.1 + View
Tarenaya hassleriana THA.LOC104819623 protein CHROMATIN REMODELING 35 isoform X1 NW_010966177.1 + View
Tripterygium wilfordii TWI79G0585 NC_052238.1 + View
Tripterygium wilfordii TWI75G0750 NC_052253.1 - View
Vaccinium macrocarpon vmacro02076 Similar to DRD1: Protein CHROMATIN REMODELING 35 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17455 Similar to DRD1: Protein CHROMATIN REMODELING 35 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01023832001 chr3 - View