Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CiPaw.07G195000 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Chr07 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G270 LG-3 + View
Arabidopsis lyrata AL7G27130 scaffold_7 - View
Avicennia marina MSTRG.19385 ScioBoG_25048_HRSCAF_25167 + View
Aquilegia oxysepala Aqoxy7G02728 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C9BI3G PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT4G25880 pumilio 6 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 6 (PUM6)%3B FUNCTIONS IN: RNA binding%2C binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0626G013 AmTr_v1.0_scaffold00025 + View
Brassica napus C01p21470 C01 + View
Brassica rapa BraA01t01670Z A01 + View
Beta vulgaris EL10Ac8g18318 K17943 - pumilio RNA-binding family (PUM) Chr8_EL10_PGA_scaffold4 + View
Cicer arietinum L. Ca_02041_v3 Ca_LG1_v3 - View
Corylus avellana Haze_21978 Similar to APUM5: Pumilio homolog 5 (Arabidopsis thaliana OX%3D3702) 3 - View
Citrus clementina Ciclev10007330m.g scaffold_1 + View
Carpinus fangiana Cfa013430 Cfa05 - View
Cardamine hirsuta CARHR233350 pumilio 6 Chr7 + View
Carica papaya Cpa.g.sc95.30 supercontig_95 + View
Chenopodium quinoa AUR62033247 APUM5: Pumilio homolog 5 C_Quinoa_Scaffold_2896 + View
Chenopodium quinoa AUR62021332 APUM5: Pumilio homolog 5 C_Quinoa_Scaffold_2862 + View
Capsella rubella Carub.0007s1507 scaffold_7 - View
Davidia involucrata Dinv25403 GWHABJS00000001 + View
Davidia involucrata Dinv26444 GWHABJS00000349 + View
Durio zibethinus Duzib150G1381 NW_019167882.1 - View
Erigeron canadensis ECA236G4575 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA240G3975 Conyza_canadensis_scaffold:5 + View
Erythranthe guttata Migut.J00818 scaffold_10 + View
Erythranthe guttata Migut.I01203 scaffold_9 + View
Eutrema salsugineum Thhalv10024383m.g scaffold_1 - View
Fragaria x ananassa FAN17G2966 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Fvb4-2 + View
Fragaria x ananassa FAN22G1110 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN07G1793 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria x ananassa FAN12G2318 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Fvb4-3 - View
Fragaria vesca FvH4_4g07600 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Fvb4 + View
Glycine max Glyma.17G060766 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Gm17 + View
Glycine max Glyma.15G163900 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Gm15 - View
Glycine max Glyma.13G099300 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Gm13 - View
Glycine max Glyma.09G057800 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Gm09 - View
Lupinus albus Lalb_Chr15g0084081 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Lalb_Chr15 - View
Lotus japonicus Lj4g0008073 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED chr4 + View
Lotus japonicus Lj6g0014025 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED chr6 + View
Lactuca sativa Lsat_1_v5_gn_8_69540 Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_7_56480 Lsat_1_v8_lg_7 + View
Magnolia biondii MBI13_g31547_MAGBIO AED:0.12 Chr13 - View
Magnolia biondii MBI16_g18212_MAGBIO AED:0.14 Chr16 + View
Malus domestica MD13G1245500 pumilio 6 Chr13 - View
Malus domestica MD16G1252800 pumilio 5 Chr16 + View
Olea europaea Oeu064536.1 chr2 - View
Prunus persica Prupe.1G079300 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Pp01 + View
Populus trichocarpa Potri.006G165100 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Chr06 + View
Populus trichocarpa Potri.008G004300 PTHR12537:SF74 - PUMILIO HOMOLOG 5-RELATED Chr08 - View
Phaseolus vulgaris Phvul.003G143000 PTHR12537//PTHR12537:SF76 - RNA BINDING PROTEIN PUMILIO-RELATED // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.009G237900 Chr09 + View
Quercus lobata QL11p004807 11 + View
Rosa chinensis RcHm_v2.0_Chr4g0400221 RcHm_v2.0_Chr4 + View
Selenicereus undatus Hund26319 Scaffold_2055 - View
Trochodendron aralioides TAR625G1324 group4 + View
Theobroma cacao Thecc.09G181000 Pumilio 5 Chromosome_9 - View
Tripterygium wilfordii TWI63G0404 NC_052240.1 + View
Vigna mungo VMungo1309G1597 CM024072.1 - View
Vigna mungo VMungo1215G1751 CM024074.1 - View