Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CiPaw.08G012600 K16241 - transcription factor HY5 (HY5) Chr08 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G15930 LG-3 + View
Acer truncatum Atru.chr7.2391 chr7 + View
Actinidia chinensis Actinidia14615 Lachesis_group14 - View
Actinidia chinensis Actinidia13247 Lachesis_group18 - View
Actinidia chinensis Actinidia22358 Lachesis_group23 + View
Actinidia chinensis Actinidia15681 Lachesis_group27 - View
Arabidopsis lyrata AL6G21890 scaffold_6 - View
Avicennia marina MSTRG.25997 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.1716 ScioBoG_102834_HRSCAF_103055 + View
Amaranthus hybridus Ah.12g064060 Transcription factor HY5 (LeHY5) (tHY5) AmaHy_arrow1_Scaffold_12 + View
Arabidopsis thaliana AT5G11260 Basic-leucine zipper (bZIP) transcription factor family protein Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity%2C they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light%2C but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes%2C and other ACEs%2C but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. ELONGATED HYPOCOTYL 5 (HY5)%3B FUNCTIONS IN: double-stranded DNA binding%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: in 13 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827)%2C bZIP transcription factor%2C bZIP-1 (InterPro:IPR011616)%2C cAMP response element binding (CREB) protein (InterPro:IPR001630)%3B BEST Arabidopsis thaliana protein match is: HY5-homolog (TAIR:AT3G17609.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica napus A10p26460 A10 + View
Brassica oleracea BolC9t59384H C9 + View
Beta vulgaris EL10Ac2g02610 K16241 - transcription factor HY5 (HY5) Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0048476 hypothetical protein CICLE_v10009720mg [Citrus clementina] Chr12 - View
Corylus avellana Haze_21543 Similar to HY5: Transcription factor HY5 (Solanum lycopersicum OX%3D4081) 3 - View
Coffea canephora Cc08_g00930 Transcription factor HY5 chr8 - View
Citrus clementina Ciclev10009720m.g scaffold_1 - View
Ceratophyllum demersum CDE07G1565 5 + View
Carpinus fangiana Cfa013170 Cfa05 - View
Cardamine hirsuta CARHR202000 Transcription factor hy5, putative Chr6 + View
Citrullus lanatus ClCG05G017050 BZIP transcription factor CG_Chr05 - View
Citrullus lanatus ClCG08G013230 Transcription factor CG_Chr08 + View
Cucumis melo MELO3C011250.2 Transcription factor HY5 chr03 - View
Cucumis melo MELO3C003686.2 transcription factor HY5 chr04 + View
Carica papaya Cpa.g.sc115.9 supercontig_115 - View
Chenopodium quinoa AUR62030640 HY5: Transcription factor HY5 C_Quinoa_Scaffold_3631 - View
Chenopodium quinoa AUR62024899 HY5: Transcription factor HY5 C_Quinoa_Scaffold_1516 + View
Capsella rubella Carub.0006s0973 PTHR13301:SF29 - TRANSCRIPTION FACTOR HY5 scaffold_6 - View
Cucumis sativus L. CsaV3_3G046530 transcription factor HY5 chr3 - View
Cucumis sativus L. CsaV3_2G031960 Transcription factor hy5 chr2 + View
Davidia involucrata Dinv30163 GWHABJS00000003 + View
Durio zibethinus Duzib168G0974 NW_019168159.1 - View
Durio zibethinus Duzib187G1164 NW_019167860.1 - View
Erigeron canadensis ECA246G3899 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA233G5819 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.C02802 Chr03 - View
Erythranthe guttata Migut.A00054 scaffold_1 - View
Erythranthe guttata Migut.E01790 scaffold_5 + View
Eutrema salsugineum Thhalv10000518m.g PTHR13301//PTHR13301:SF68 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED scaffold_15 + View
Eutrema salsugineum Thhalv10014851m.g scaffold_2 - View
Fragaria x ananassa FAN27G1734 PTHR13301//PTHR13301:SF68 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Fvb2-1 - View
Fragaria x ananassa FAN20G2840 PTHR13301//PTHR13301:SF68 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Fvb2-3 + View
Fragaria x ananassa FAN24G0610 PTHR13301:SF29 - TRANSCRIPTION FACTOR HY5 Fvb2-2 + View
Fragaria vesca FvH4_2g29440 PTHR13301:SF29 - TRANSCRIPTION FACTOR HY5 Fvb2 - View
Lactuca sativa Lsat_1_v5_gn_6_22420 K16241 - transcription factor HY5 (HY5) Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_5_30441 K16241 - transcription factor HY5 (HY5) Lsat_1_v8_lg_5 - View
Magnolia biondii MBI01_g37815_MAGBIO AED:0.07 Chr01 + View
Malus domestica MD08G1147100 Basic-leucine zipper (bZIP) transcription factor family protein Chr08 + View
Manihot esculenta Manes.16G120300 Chromosome16 + View
Nelumbo nucifera Nn8g39399 chr8 + View
Olea europaea Oeu042677.1 scaffold406 + View
Oryza sativa ssp. japonica Os06g0601500 Similar to BZIP2. bZIP transcription factor, HY5 transcription factor ortholog, Control of plant height, Regulation of panicle development and seed set chr06 + View
Oryza sativa ssp. japonica Os02g0203000 bZIP transcription factor, Homolog of Arabidopsis HY5 transcription factor, Photomorphogenesis chr02 - View
Oryza sativa ssp. japonica Os01g0174000 bZIP transcription factor, Homolog of Arabidopsis HY5 transcription factor, Regulation of heading date chr01 - View
Punica granatum PGR044G2450 NC_045134.1 + View
Prunus persica Prupe.1G478400 K16241 - transcription factor HY5 (HY5) Pp01 + View
Papaver somniferum PSO170G2824 NC_039360.1 + View
Papaver somniferum PSO455G0037 NW_020634374.1 + View
Populus trichocarpa Potri.006G251800 K16241 - transcription factor HY5 (HY5) Chr06 + View
Populus trichocarpa Potri.018G029500 K16241 - transcription factor HY5 (HY5) Chr18 - View
Quercus lobata QL02p022301 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0298231 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim02G0199000 chr02 + View
Striga asiatica SGA_v2.0_scaffold169G38721 scaffold169 + View
Salvia bowleyana SalBow1G4423 GWHASIU00000001 + View
Salix brachista Sabra18G0031500 GWHAAZH00000018 - View
Salix brachista Sabra06G0196800 GWHAAZH00000006 + View
Simmondsia chinensis Sc09g0008360 GWHAASQ00000009 - View
Sechium edule Sed0006241 LG03 + View
Sechium edule Sed0012522 LG13 - View
Solanum lycopersicum Solyc08g061130.3 Transcription factor HY5 (AHRD V3.3 *** A0A1U8E2N7_CAPAN) SL4.0ch08 - View
Schrenkiella parvula Sp4g04910 PTHR13301//PTHR13301:SF68 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED ch4-2 - View
Solanum pennellii Sopen08g016230 Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the genes promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. | ELONGATED HYPOCOTYL 5 (HY5) | FUNCTIONS IN: double-stranded DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 13 processes | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor , bZIP transcription factor, bZIP-1 , cAMP response element binding (CREB) protein | BEST Arabidopsis thaliana protein match is: HY5-homolog Spenn-ch08 + View
Trochodendron aralioides TAR383G0122 group10 - View
Trochodendron aralioides TAR626G0278 group3 + View
Trochodendron aralioides TAR625G0164 group4 - View
Theobroma cacao Thecc.09G150300 Basic-leucine zipper transcription factor family protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104803666 transcription factor HY5-like NW_010971389.1 + View
Tripterygium wilfordii TWI63G1394 NC_052240.1 + View
Tripterygium wilfordii TWI34G0582 NC_052235.1 - View
Vaccinium macrocarpon vmacro11154 Similar to HY5: Transcription factor HY5 (Solanum lycopersicum OX%3D4081) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01035829001 chr4 + View
Zea mays Zm00001eb235510 Zm00001e013997 Transcription factor HY5 5 + View
Zea mays Zm00001eb122740 Zm00001e016746 Transcription factor HY5-like 3 + View