Gene: Solyc08g061130.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g061130.3
  • Transcript Identifier Solyc08g061130.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 44862260-44865347 : negative

Gene Family Information

  • ID HOM05D002942
  • #Genes/#Species 234/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g061130.3.1
  • uniprot Q9SM50
  • gene_id Solyc08g061130

Descriptions

  • Description Transcription factor HY5 (AHRD V3.3 *** A0A1U8E2N7_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010218
IBA
GOA Databaseresponse to far red light
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT3G17609
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G11260
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT5G11260
GO:0031539
ISO
PLAZA Integrative Orthologypositive regulation of anthocyanin metabolic process AT5G11260
GO:0042753
ISO
PLAZA Integrative Orthologypositive regulation of circadian rhythm AT5G11260
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT5G11260
GO:0009787
ISO
PLAZA Integrative Orthologyregulation of abscisic acid-activated signaling pathway AT5G11260
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT3G17609
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G11260
GO:0010114
IBA
GOA Databaseresponse to red light
GO:0010099
IBA
GOA Databaseregulation of photomorphogenesis
GO:0010017
IBA
IEA
GOA Databasered or far-red light signaling pathway
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0009585
IEA
GOA Databasered, far-red light phototransduction

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G17609
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G17609
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT5G11260
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000981
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000981
IEA
InterProDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032993
ISO
PLAZA Integrative Orthologyprotein-DNA complex AT5G11260
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004827 Basic-leucine zipper domain
IPR044280 Transcriptional activator Hac1/HY5
Mapman id Description
15.5.4.1 RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (bZIP)
15.5.4.3 RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (HY5)
26.1.3.2 External stimuli response.light.UV-B light.transcriptional regulator (HY5)