Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CiPaw.01G107000 K07904 - Ras-related protein Rab-11A (RAB11A) Chr01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G8540 LG-1 - View
Aethionema arabicum Aa31LG1G24940 LG-1 - View
Acer truncatum Atru.chr3.1680 chr3 - View
Actinidia chinensis Actinidia32940 Lachesis_group0 - View
Actinidia chinensis Actinidia35885 Lachesis_group8 + View
Arabidopsis lyrata AL1G15740 scaffold_1 + View
Arabidopsis lyrata AL4G41790 scaffold_4 - View
Avicennia marina MSTRG.24606 ScioBoG_4088_HRSCAF_4107 + View
Aquilegia oxysepala Aqoxy2G03961 CHR02 + View
Arabidopsis thaliana AT2G43130 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a protein belonging to the Rab/Ypt family of small GTPases%2C which are implicated in intracellular vesicular traffic. ARA4%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: response to heat%2C inter-Golgi cisterna vesicle-mediated transport%3B LOCATED IN: trans-Golgi network%2C Golgi stack%2C plasma membrane%2C Golgi-associated vesicle%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041)%2C Ras (InterPro:IPR013753)%2C Rab11-related (InterPro:IPR015595)%2C Ras small GTPase%2C Ras type (InterPro:IPR003577)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%2C Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Small GTPase (InterPro:IPR020851)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1)%3B Has 26465 Blast hits to 26427 proteins in 733 species: Archae - 21%3B Bacteria - 130%3B Metazoa - 13921%3B Fungi - 3601%3B Plants - 3013%3B Viruses - 20%3B Other Eukaryotes - 5759 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT1G05810 Rab GTPase-like A5A protein RAB GTPase homolog A5E (RABA5E)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab11-related (InterPro:IPR015595)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1)%3B Has 27587 Blast hits to 27548 proteins in 749 species: Archae - 23%3B Bacteria - 136%3B Metazoa - 14522%3B Fungi - 3761%3B Plants - 3260%3B Viruses - 20%3B Other Eukaryotes - 5865 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC02g12411 ChrC02 + View
Brassica carinata BcaC01g05260 ChrC01 + View
Brassica carinata BcaC01g00540 ChrC01 - View
Brassica napus C04p04220 C04 - View
Brassica napus A05p03620 A05 - View
Brassica napus A03p24000 A03 - View
Brassica oleracea BolC4t22059H C4 - View
Brassica oleracea BolC4t28515H C4 - View
Brassica oleracea BolC3t15225H C3 - View
Brassica rapa BraA05t19348Z A05 - View
Brassica rapa BraA03t11612Z A03 - View
Camellia sinensis var. sinensis CSS0028928 PREDICTED: ras-related protein RABA5e [Prunus mume] Contig578 + View
Camellia sinensis var. sinensis CSS0011785 PREDICTED: ras-related protein RABA5e [Prunus mume] Contig913 + View
Corylus avellana Haze_11062 Similar to RABA5D: Ras-related protein RABA5d (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc03_g10260 Ras-related protein RABA5d chr3 + View
Citrus clementina Ciclev10022137m.g scaffold_3 + View
Carpinus fangiana Cfa008561 Cfa03 - View
Cardamine hirsuta CARHR005340 Ras-related protein Rab-25 Chr1 + View
Cardamine hirsuta CARHR138200 Ras-related protein Rab-25 Chr4 - View
Cucumis melo MELO3C017670.2 Ras family chr07 + View
Capsella rubella Carub.0001s0516 PTHR24073//PTHR24073:SF394 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5B-RELATED scaffold_1 + View
Capsella rubella Carub.0004s2561 PTHR24073//PTHR24073:SF394 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5B-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_4G003850 Ras-related protein like chr4 - View
Davidia involucrata Dinv44231 GWHABJS00000014 - View
Davidia involucrata Dinv22664 GWHABJS00000016 + View
Durio zibethinus Duzib212G0900 NW_019168026.1 - View
Durio zibethinus Duzib151G1012 NW_019167904.1 - View
Durio zibethinus Duzib268G1727 NW_019168270.1 - View
Eucalyptus grandis Eucgr.A00215 Chr01 + View
Erythranthe guttata Migut.N00434 scaffold_14 + View
Eutrema salsugineum Thhalv10008743m.g K07905 - Ras-related protein Rab-11B (RAB11B) scaffold_5 - View
Eutrema salsugineum Thhalv10017231m.g PTHR24073:SF394 - RAS-RELATED PROTEIN RABA5B-RELATED scaffold_10 - View
Fragaria vesca FvH4_4g11760 K07904 - Ras-related protein Rab-11A (RAB11A) Fvb4 + View
Gossypium hirsutum Gohir.D10G130800 PTHR24073//PTHR24073:SF394 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5B-RELATED D10 - View
Gossypium hirsutum Gohir.A10G135900 PTHR24073//PTHR24073:SF394 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5B-RELATED A10 + View
Gossypium raimondii Gorai.011G144500 Chr11 - View
Lupinus albus Lalb_Chr01g0003441 K07904 - Ras-related protein Rab-11A (RAB11A) Lalb_Chr01 + View
Malus domestica MD04G1033200 RAB GTPase homolog A5D Chr04 + View
Malus domestica MD13G1276500 P-loop containing nucleoside triphosphate hydrolases superfamily protein Chr13 - View
Manihot esculenta Manes.11G113500 Chromosome11 + View
Petunia axillaris Peaxi162Scf00286g00439 Ras-related protein Rab-11A Peaxi162Scf00286 - View
Punica granatum PGR083G2322 NC_045133.1 - View
Prunus persica Prupe.1G181200 K07904 - Ras-related protein Rab-11A (RAB11A) Pp01 - View
Populus trichocarpa Potri.014G150300 K07904 - Ras-related protein Rab-11A (RAB11A) Chr14 - View
Populus trichocarpa Potri.002G231800 K07904 - Ras-related protein Rab-11A (RAB11A) Chr02 + View
Quercus lobata QL10p046807 10 + View
Rosa chinensis RcHm_v2.0_Chr4g0409011 RcHm_v2.0_Chr4 + View
Salix brachista Sabra14G0113900 GWHAAZH00000014 - View
Sechium edule Sed0012423 LG02 - View
Sechium edule Sed0004682 LG12 - View
Schrenkiella parvula Sp1g04620 K07905 - Ras-related protein Rab-11B (RAB11B) ch1-1 + View
Trochodendron aralioides TAR362G0665 group17 + View
Theobroma cacao Thecc.04G181200 RAB GTPase A5E Chromosome_4 - View
Tarenaya hassleriana THA.LOC104823360 ras-related protein RABA5c-like NW_010960187.1 - View
Tripterygium wilfordii TWI15G0196 NC_052247.1 - View