Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G17560 LG-8 - View
Aethionema arabicum Aa31LG2G22230 LG-2 + View
Acer truncatum Atru.chr6.2897 chr6 - View
Actinidia chinensis Actinidia11091 Lachesis_group5 - View
Actinidia chinensis Actinidia11016 Lachesis_group19 - View
Arabidopsis lyrata AL7G24220 scaffold_7 - View
Arabidopsis lyrata AL3G53730 scaffold_3 - View
Avicennia marina MSTRG.6802 ScioBoG_102840_HRSCAF_103099 - View
Aquilegia oxysepala Aqoxy1G02375 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SG72Z3 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5TEV2E PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT2G20650 RING/U-box superfamily protein Encodes a putative RING E3 ubiquitin ligase based on its 84.5%25 amino acid identity with FLY1%2C which possesses this activity in vitro. It is predicted to be localized to the endomembrane system based on protein topology. RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28370.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G28370 RING/U-box superfamily protein Encodes an E3 ubiquitin ligase that is involved in plant cell wall modification%2C seed mucilage extrusion%2C and controls the degree of pectin methylesterification in seed mucilage. It is located in the endomembrane system%2C likely localized in late endosome/multivesicular bodies/prevacular compartment. It has been shown to ubiquitinate proteins in conjunction with UBA1 and UBC8. RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20650.2)%3B Has 309 Blast hits to 308 proteins in 35 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 74%3B Fungi - 25%3B Plants - 165%3B Viruses - 0%3B Other Eukaryotes - 45 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC07g38328 ChrC07 + View
Brassica carinata BcaB03g16858 ChrB03 - View
Brassica carinata BcaB03g12570 ChrB03 + View
Brassica carinata BcaC06g36756 ChrC06 - View
Brassica napus C08p10830 C08 + View
Brassica napus A08p20090 A08 - View
Brassica napus A07p00120 A07 + View
Brassica napus C07p00280 C07 + View
Brassica oleracea BolC8t48758H C8 + View
Brassica oleracea BolC7t40478H C7 + View
Brassica rapa BraA08t33968Z A08 - View
Brassica rapa BraA07t27805Z A07 + View
Beta vulgaris EL10Ac9g20792 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0000262 protein binding protein, putative [Ricinus communis] Chr7 + View
Cannabis sativa CANSAT64G2319 NC_044379.1 + View
Cicer arietinum L. Ca_18937_v3 Ca_LG6_v3 - View
Corylus avellana Haze_13201 Similar to FLY2: Transmembrane E3 ubiquitin-protein ligase FLY2 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc05_g07440 RING/U-box superfamily protein chr5 + View
Citrus clementina Ciclev10014745m.g scaffold_2 - View
Cardamine hirsuta CARHR111300 RING/U-box superfamily protein Chr3 - View
Cardamine hirsuta CARHR236110 RING-H2 finger protein 2B Chr7 + View
Carya illinoinensis CiPaw.03G179000 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Chr03 + View
Citrullus lanatus ClCG02G017760 RING zinc finger protein, putative CG_Chr02 + View
Carica papaya Cpa.g.sc83.63 supercontig_83 + View
Capsella rubella Carub.0007s1237 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B scaffold_7 - View
Capsella rubella Carub.0003s3517 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B scaffold_3 - View
Daucus carota DCAR_009753 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv13394 GWHABJS00000013 + View
Davidia involucrata Dinv04814 GWHABJS00000001 - View
Eucalyptus grandis Eucgr.K01043 Chr11 + View
Eutrema salsugineum Thhalv10002192m.g PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B scaffold_12 - View
Eutrema salsugineum Thhalv10024798m.g scaffold_1 - View
Fragaria x ananassa FAN02G3736 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Fvb6-4 + View
Fragaria x ananassa FAN14G3021 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Fvb6-1 - View
Fragaria x ananassa FAN09G2589 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Fvb6-2 - View
Fragaria x ananassa FAN05G5576 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Fvb6-3 - View
Fragaria vesca FvH4_6g26490 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Fvb6 + View
Gossypium hirsutum Gohir.D02G178700 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B D02 - View
Gossypium hirsutum Gohir.A03G155600 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B A03 - View
Glycine max Glyma.12G116100 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Gm12 + View
Glycine max Glyma.06G290800 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Gm06 - View
Glycine max Glyma.13G295600 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Gm13 - View
Glycine max Glyma.12G205300 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Gm12 + View
Gossypium raimondii Gorai.005G200400 Chr05 - View
Hydrangea macrophylla Hma1.2p1_0002F.1_g002080 Hma1.2p1_0002F.1 + View
Lupinus albus Lalb_Chr03g0029541 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Lalb_Chr03 + View
Lupinus albus Lalb_Chr01g0005151 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Lalb_Chr01 - View
Lupinus albus Lalb_Chr19g0135191 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Lalb_Chr19 - View
Lotus japonicus Lj3g0017215 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B chr3 + View
Lotus japonicus Lj3g0011593 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B chr3 - View
Lonicera japonica Lj1A714G27 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_4_66820 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Lsat_1_v8_lg_4 - View
Malus domestica MD17G1236500 RING/U-box superfamily protein Chr17 - View
Malus domestica MD09G1244500 RING/U-box superfamily protein Chr09 - View
Manihot esculenta Manes.13G144800 Chromosome13 - View
Medicago truncatula Medtr4g078525 RING/U-box protein chr4 + View
Nelumbo nucifera Nn1g06483 chr1 - View
Nelumbo nucifera Nn1g04141 chr1 + View
Nicotiana tabacum Nitab4.5_0000638g0120 Unknown Nitab4.5_0000638 - View
Olea europaea Oeu036067.1 chr6 - View
Punica granatum PGR142G0821 NC_045128.1 - View
Prunus persica Prupe.3G139300 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Pp03 + View
Pisum sativum Psat7g168720 Ring finger domain chr7LG7 - View
Papaver somniferum PSO675G5152 NC_039358.1 + View
Papaver somniferum PSO541G1897 NC_039363.1 - View
Populus trichocarpa Potri.007G139300 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Chr07 - View
Populus trichocarpa Potri.017G012600 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B Chr17 + View
Phaseolus vulgaris Phvul.011G119730 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B Chr11 + View
Phaseolus vulgaris Phvul.005G102100 Chr05 - View
Quercus lobata QL08p039658 8 + View
Rosa chinensis RcHm_v2.0_Chr2g0127681 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0139400 chr06 - View
Striga asiatica SGA_v2.0_scaffold34G13945 scaffold34 + View
Simmondsia chinensis Sc21g0003070 GWHAASQ00000021 + View
Sechium edule Sed0026522 LG05 + View
Sechium edule Sed0007610 LG01 - View
Solanum lycopersicum Solyc07g053850.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L742_ARTAN) SL4.0ch07 - View
Schrenkiella parvula Sp7g26330 PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B ch7-5 + View
Schrenkiella parvula Sp3g33900 PTHR22763//PTHR22763:SF71 - RING ZINC FINGER PROTEIN // PROTEIN Y105C5B.11, ISOFORM B ch3-6 - View
Solanum pennellii Sopen07g027820 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400032816 Zinc finger family protein ST4.03ch07 + View
Selenicereus undatus Hund01030 Scaffold_33678 + View
Trochodendron aralioides TAR626G1453 group3 + View
Trochodendron aralioides TAR627G0937 group6 - View
Theobroma cacao Thecc.02G182400 RING/U-box superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104804057 transmembrane E3 ubiquitin-protein ligase 1 NW_010971389.1 - View
Tripterygium wilfordii TWI23G0225 NC_052239.1 + View
Tripterygium wilfordii TWI59G0686 NC_052248.1 + View
Vaccinium macrocarpon vmacro12326 Similar to FLY1: Transmembrane E3 ubiquitin-protein ligase FLY1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0203 CM024079.1 + View
Vitis vinifera GSVIVG01020571001 chr12 - View