Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG2G12750 | LG-2 | - | View | |
Acer truncatum | Atru.chr9.1307 | chr9 | + | View | |
Actinidia chinensis | Actinidia02138 | Lachesis_group23 | - | View | |
Actinidia chinensis | Actinidia14423 | Lachesis_group6 | - | View | |
Arabidopsis lyrata | AL7G38150 | scaffold_7 | + | View | |
Avicennia marina | MSTRG.12103 | ScioBoG_17730_HRSCAF_17811 | - | View | |
Aquilegia oxysepala | Aqoxy7G00764 | CHR07 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.908HV2 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | arahy.Tifrunner.gnm1.Arahy.01 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.F25RYT | PTHR12650//PTHR26374//PTHR26374:SF185 - 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI // FAMILY NOT NAMED // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.15 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.0SN27X | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | arahy.Tifrunner.gnm1.Arahy.05 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.369ZBB | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arabidopsis thaliana | AT4G16610 | C2H2-like zinc finger protein C2H2-like zinc finger protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1)%3B Has 282 Blast hits to 280 proteins in 53 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 52%3B Fungi - 13%3B Plants - 204%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink). | Chr4 | - | View |
Brassica napus | A03p50020 | A03 | - | View | |
Brassica oleracea | BolC1t02553H | C1 | - | View | |
Camellia sinensis var. sinensis | CSS0027051 | PREDICTED: zinc finger protein ZAT1-like [Nelumbo nucifera] | Chr14 | - | View |
Camellia sinensis var. sinensis | CSS0034211 | PREDICTED: zinc finger protein ZAT1-like [Nelumbo nucifera] | Chr12 | + | View |
Camellia sinensis var. sinensis | CSS0047209 | PREDICTED: zinc finger protein ZAT1-like [Nelumbo nucifera] | Chr3 | + | View |
Cannabis sativa | CANSAT21G2160 | NC_044374.1 | - | View | |
Cicer arietinum L. | Ca_21969_v3 | Ca_LG7_v3 | - | View | |
Corylus avellana | Haze_07909 | Similar to ZAT1: Zinc finger protein ZAT1 (Arabidopsis thaliana OX%3D3702) | 4 | + | View |
Citrus clementina | Ciclev10021224m.g | scaffold_3 | + | View | |
Ceratophyllum demersum | CDE04G0955 | 2 | + | View | |
Ceratophyllum demersum | CDE09G0755 | 7 | + | View | |
Cardamine hirsuta | CARHR223110 | C2H2-like zinc finger protein | Chr7 | - | View |
Carya illinoinensis | CiPaw.11G079500 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Chr11 | - | View |
Carya illinoinensis | CiPaw.12G052400 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Chr12 | + | View |
Citrullus lanatus | ClCG10G002630 | C2H2-like zinc finger protein LENGTH=288 | CG_Chr10 | + | View |
Citrullus lanatus | ClCG01G004070 | C2H2-like zinc finger protein LENGTH=314 | CG_Chr01 | - | View |
Cucumis melo | MELO3C005530.2 | zinc finger protein ZAT9 | chr09 | + | View |
Cucumis melo | MELO3C013935.2 | zinc finger protein ZAT4-like | chr06 | + | View |
Corchorus olitorius | COL.COLO4_37170 | Zinc finger%2C C2H2-like protein | AWUE01023851.1 | + | View |
Carica papaya | Cpa.g.sc29.163 | supercontig_29 | - | View | |
Capsella rubella | Carub.0007s2479 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | scaffold_7 | + | View |
Cucumis sativus L. | CsaV3_5G004240 | zinc finger protein ZAT9 | chr5 | - | View |
Cucumis sativus L. | CsaV3_3G002660 | zinc finger protein ZAT4-like | chr3 | + | View |
Davidia involucrata | Dinv21642 | GWHABJS00000017 | - | View | |
Davidia involucrata | Dinv39150 | GWHABJS00000003 | - | View | |
Durio zibethinus | Duzib205G1684 | NW_019168381.1 | + | View | |
Durio zibethinus | Duzib068G0794 | NW_019167838.1 | + | View | |
Durio zibethinus | Duzib138G0074 | NW_019167893.1 | + | View | |
Eucalyptus grandis | Eucgr.D02083 | Chr04 | - | View | |
Eutrema salsugineum | Thhalv10026010m.g | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | scaffold_1 | + | View |
Fragaria x ananassa | FAN13G2590 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Fvb5-2 | - | View |
Fragaria x ananassa | FAN08G0309 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Fvb5-3 | + | View |
Fragaria x ananassa | FAN18G0011 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Fvb5-1 | + | View |
Fragaria x ananassa | FAN04G1302 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Fvb5-4 | - | View |
Fragaria vesca | FvH4_5g19030 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Fvb5 | - | View |
Gossypium hirsutum | Gohir.A08G170100 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | A08 | + | View |
Gossypium hirsutum | Gohir.D12G219400 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | D12 | + | View |
Gossypium hirsutum | Gohir.D08G188400 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | D08 | + | View |
Gossypium hirsutum | Gohir.A12G216900 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | A12 | + | View |
Glycine max | Glyma.05G059800 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Gm05 | - | View |
Glycine max | Glyma.01G209100 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Gm01 | + | View |
Glycine max | Glyma.11G033100 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Gm11 | - | View |
Glycine max | Glyma.17G142300 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Gm17 | - | View |
Gossypium raimondii | Gorai.008G235100 | Chr08 | + | View | |
Gossypium raimondii | Gorai.004G198300 | Chr04 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0316F.1_g123130 | Hma1.2p1_0316F.1 | + | View | |
Hydrangea macrophylla | Hma1.2p1_1172F.1_g263650 | Hma1.2p1_1172F.1 | - | View | |
Lupinus albus | Lalb_Chr16g0386711 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Lalb_Chr16 | - | View |
Lupinus albus | Lalb_Chr05g0214451 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Lalb_Chr05 | + | View |
Lotus japonicus | Lj2g0020042 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | chr2 | + | View |
Lotus japonicus | Lj4g0002770 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | chr4 | - | View |
Lactuca sativa | Lsat_1_v5_gn_3_1101 | PTHR26374:SF175 - C2H2-LIKE ZINC FINGER PROTEIN-RELATED | Lsat_1_v8_lg_3 | - | View |
Malus domestica | MD06G1057700 | C2H2-like zinc finger protein | Chr06 | + | View |
Manihot esculenta | Manes.01G081000 | Chromosome01 | - | View | |
Manihot esculenta | Manes.02G039900 | Chromosome02 | - | View | |
Medicago truncatula | Medtr4g100860 | C2H2-type zinc-finger protein, putative | chr4 | + | View |
Medicago truncatula | Medtr5g012630 | zinc finger ZAT9-like protein | chr5 | - | View |
Nelumbo nucifera | Nn6g33954 | chr6 | + | View | |
Petunia axillaris | Peaxi162Scf00102g00108 | C2H2-like zinc finger protein | Peaxi162Scf00102 | + | View |
Punica granatum | PGR031G0466 | NC_045127.1 | + | View | |
Prunus persica | Prupe.5G068600 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Pp05 | + | View |
Pisum sativum | Psat2g177960 | C2H2-type zinc finger | chr2LG1 | + | View |
Populus trichocarpa | Potri.003G077200 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Chr03 | - | View |
Populus trichocarpa | Potri.001G157700 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Chr01 | + | View |
Phaseolus vulgaris | Phvul.003G221000 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | Chr03 | - | View |
Quercus lobata | QL12p012068 | 12 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr7g0203441 | RcHm_v2.0_Chr7 | - | View | |
Salix brachista | Sabra03G0047600 | GWHAAZH00000003 | - | View | |
Salix brachista | Sabra01G0133800 | GWHAAZH00000001 | - | View | |
Sechium edule | Sed0001929 | LG04 | + | View | |
Sechium edule | Sed0020833 | LG01 | + | View | |
Solanum lycopersicum | Solyc08g078590.1 | Zinc finger protein (AHRD V3.3 *** A0A200PXY0_9MAGN) | SL4.0ch08 | - | View |
Solanum lycopersicum | Solyc06g060740.3 | Zinc finger protein (AHRD V3.3 *** A0A200PXY0_9MAGN) | SL4.0ch06 | + | View |
Schrenkiella parvula | Sp7g15230 | PF13912 - C2H2-type zinc finger (zf-C2H2_6) | ch7-4 | - | View |
Solanum pennellii | Sopen08g027070 | C2H2-like zinc finger protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein | Spenn-ch08 | - | View |
Solanum tuberosum | PGSC0003DMG400011873 | Cys2/His2 zinc-finger transcription factor | ST4.03ch06 | + | View |
Solanum tuberosum | PGSC0003DMG400004763 | Zinc finger protein | ST4.03ch08 | - | View |
Trochodendron aralioides | TAR629G0567 | group0 | + | View | |
Trochodendron aralioides | TAR375G0447 | group15 | + | View | |
Trochodendron aralioides | TAR374G0008 | group12 | + | View | |
Theobroma cacao | Thecc.03G250600 | C2H2-like zinc finger protein | Chromosome_3 | + | View |
Trifolium pratense | TPR.G37585 | Tp57577_TGAC_v2_LG5 | - | View | |
Trifolium pratense | TPR.G25888 | Tp57577_TGAC_v2_LG2 | + | View | |
Tripterygium wilfordii | TWI81G0240 | NC_052251.1 | + | View | |
Tripterygium wilfordii | TWI60G0642 | NC_052246.1 | - | View | |
Vaccinium macrocarpon | vmacro13448 | Similar to ZAT9: Zinc finger protein ZAT9 (Arabidopsis thaliana OX%3D3702) | chr7_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo0251G1335 | CM024069.1 | + | View | |
Vigna mungo | VMungo1215G3293 | CM024074.1 | - | View | |
Zea mays | Zm00001eb023490 | Zm00001e002344 Zinc finger protein ZAT9 | 1 | + | View |