Gene: AT4G16610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G16610
  • Transcript Identifier AT4G16610.1
  • Gene Type Coding gene
  • Location Chr4 : 9354568-9355182 : negative

Gene Family Information

  • ID HOM05D001867
  • #Genes/#Species 352/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G16610.1
  • uniprot O23504

Descriptions

  • Description C2H2-like zinc finger protein
  • Computational description C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 282 Blast hits to 280 proteins in 53 species: Archae - 0; Bacteria - 4; Metazoa - 52; Fungi - 13; Plants - 204; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000976
ISO
PLAZA Tree-based Orthologytranscription cis-regulatory region binding AT3G60580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR044303 Zinc finger protein ZAT1/4/9
Mapman id Description
35.1 not assigned.annotated