Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G14950 LG-5 - View
Acer truncatum Atru.chr5.1710 chr5 + View
Acer truncatum Atru.chr2.970 chr2 + View
Actinidia chinensis Actinidia09540 Lachesis_group15 + View
Arabidopsis lyrata AL3G14520 scaffold_3 - View
Avicennia marina MSTRG.17495 ScioBoG_19834_HRSCAF_19925 + View
Amaranthus hybridus Ah.06g191830 AmaHy_arrow1_Scaffold_6 - View
Aquilegia oxysepala Aqoxy5G00218 CHR05 - View
Aquilegia oxysepala Aqoxy2G03660 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7VWF6Q PF04852 - Protein of unknown function (DUF640) (DUF640) arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3M3KZ3 PF04852 - Protein of unknown function (DUF640) (DUF640) arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3YCL0F PF04852 - Protein of unknown function (DUF640) (DUF640) arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT3G04510 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) LIGHT SENSITIVE HYPOCOTYLS 2 (LSH2)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 4 leaf senescence stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT5G28490.1)%3B Has 309 Blast hits to 309 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 12%3B Fungi - 0%3B Plants - 297%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0736G034 AmTr_v1.0_scaffold00067 - View
Brassica carinata BcaB04g19321 ChrB04 + View
Brassica carinata BcaC05g29936 ChrC05 + View
Brassica carinata BcaC01g04367 ChrC01 + View
Brassica carinata BcaC05g30192 ChrC05 + View
Brassica napus A05p42960 A05 + View
Brassica napus C03p40850 C03 - View
Brassica napus C05p62740 C05 + View
Brassica napus A03p33660 A03 - View
Brassica oleracea BolC5t34927H C5 + View
Brassica rapa BraA05t23041Z A05 + View
Brassica rapa BraA03t12540Z A03 - View
Beta vulgaris EL10Ac4g09001 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0036206 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Vitis vinifera] Chr1 + View
Camellia sinensis var. sinensis CSS0033148 hypothetical protein POPTR_0005s24730g [Populus trichocarpa] Chr11 - View
Camellia sinensis var. sinensis CSS0009636 hypothetical protein POPTR_0005s24730g [Populus trichocarpa] Chr13 - View
Capsicum annuum CAN.G1609.13 PGAv.1.6.scaffold1609 + View
Cannabis sativa CANSAT01G2841 NC_044373.1 - View
Cannabis sativa CANSAT54G0564 NC_044375.1 - View
Corylus avellana Haze_04436 Similar to LSH1: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_24644 Similar to LSH3: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc02_g08880 Protein of unknown function (DUF640) chr2 + View
Coffea canephora Cc03_g05620 Protein of unknown function (DUF640) chr3 + View
Citrus clementina Ciclev10022295m.g scaffold_3 - View
Citrus clementina Ciclev10022288m.g scaffold_3 - View
Cardamine hirsuta CARHR078700 Protein of unknown function (DUF640) Chr3 - View
Carya illinoinensis CiPaw.07G074200 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr07 - View
Carya illinoinensis CiPaw.04G187300 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr04 + View
Carya illinoinensis CiPaw.03G265500 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr03 + View
Cucumis melo MELO3C004422.2 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like chr05 + View
Chenopodium quinoa AUR62004832 LSH6: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 C_Quinoa_Scaffold_3820 - View
Chenopodium quinoa AUR62040919 LSH6: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 C_Quinoa_Scaffold_3641 - View
Capsella rubella Carub.0003s0367 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED scaffold_3 - View
Daucus carota DCAR_027321 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv22397 GWHABJS00000007 + View
Davidia involucrata Dinv29851 GWHABJS00000016 - View
Davidia involucrata Dinv34635 GWHABJS00000010 - View
Durio zibethinus Duzib133G1470 NW_019167938.1 + View
Durio zibethinus Duzib212G0778 NW_019168026.1 - View
Durio zibethinus Duzib052G0648 NW_019167849.1 + View
Durio zibethinus Duzib211G0016 NW_019168049.1 + View
Durio zibethinus Duzib138G0192 NW_019167893.1 + View
Durio zibethinus Duzib177G0319 NW_019168004.1 - View
Durio zibethinus Duzib128G0347 NW_019168481.1 + View
Durio zibethinus Duzib106G1946 NW_019168492.1 + View
Erigeron canadensis ECA236G4273 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA247G2065 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.H04235 Chr08 - View
Eucalyptus grandis Eucgr.H03039 Chr08 - View
Eucalyptus grandis Eucgr.B02146 Chr02 + View
Erythranthe guttata Migut.N00276 scaffold_14 + View
Fragaria x ananassa FAN14G4745 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb6-1 + View
Fragaria x ananassa FAN02G3538 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb6-4 - View
Fragaria x ananassa FAN05G4493 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Fvb6-3 - View
Fragaria x ananassa FAN09G0810 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb6-2 + View
Fragaria x ananassa FAN27G3137 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Fvb2-1 - View
Fragaria x ananassa FAN14G0668 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb6-1 + View
Fragaria x ananassa FAN24G0916 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Fvb2-2 + View
Fragaria x ananassa FAN05G1042 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Fvb6-3 + View
Fragaria vesca FvH4_6g01940 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb6 - View
Fragaria vesca FvH4_2g21310 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Fvb2 - View
Gossypium hirsutum Gohir.D11G258100 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D11 - View
Gossypium hirsutum Gohir.A07G149300 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED A07 + View
Gossypium hirsutum Gohir.A11G247700 PF04852 - Protein of unknown function (DUF640) (DUF640) A11 - View
Gossypium hirsutum Gohir.D07G155400 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D07 + View
Gossypium hirsutum Gohir.D13G173100 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D13 - View
Gossypium hirsutum Gohir.D11G137200 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D11 + View
Gossypium hirsutum Gohir.A13G167700 PF04852 - Protein of unknown function (DUF640) (DUF640) A13 - View
Glycine max Glyma.10G166100 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm10 + View
Glycine max Glyma.10G037600 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm10 - View
Glycine max Glyma.19G165300 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm19 + View
Glycine max Glyma.19G248300 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm19 + View
Glycine max Glyma.03G164000 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm03 + View
Glycine max Glyma.03G250900 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm03 + View
Glycine max Glyma.20G223100 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm20 - View
Gossypium raimondii Gorai.013G187500 Chr13 + View
Gossypium raimondii Gorai.007G147000 Chr07 + View
Gossypium raimondii Gorai.007G276300 Chr07 - View
Gossypium raimondii Gorai.001G178100 Chr01 + View
Lupinus albus Lalb_Chr06g0168281 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Lalb_Chr06 + View
Lupinus albus Lalb_Chr02g0152501 PF04852 - Protein of unknown function (DUF640) (DUF640) Lalb_Chr02 + View
Lotus japonicus Lj1g0003613 PF04852 - Protein of unknown function (DUF640) (DUF640) chr1 - View
Lotus japonicus Lj5g0023611 PF04852 - Protein of unknown function (DUF640) (DUF640) chr5 - View
Lonicera japonica Lj2C41T7 GWHAAZE00000002 + View
Lonicera japonica Lj1C67T5 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_8221 PF04852 - Protein of unknown function (DUF640) (DUF640) Lsat_1_v8_lg_9 + View
Malus domestica MD04G1229700 Protein of unknown function (DUF640) Chr04 + View
Manihot esculenta Manes.08G139300 Chromosome08 + View
Manihot esculenta Manes.12G033200 Chromosome12 + View
Manihot esculenta Manes.09G148200 Chromosome09 - View
Manihot esculenta Manes.13G035100 Chromosome13 + View
Manihot esculenta Manes.03G163600 Chromosome03 - View
Medicago truncatula Medtr1g080210 light-dependent short hypocotyls protein chr1 + View
Medicago truncatula Medtr7g115700 light-dependent short hypocotyls protein chr7 + View
Petunia axillaris Peaxi162Scf00015g03113 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 Peaxi162Scf00015 - View
Punica granatum PGR004G2033 NC_045131.1 + View
Prunus persica Prupe.6G349800 PF04852 - Protein of unknown function (DUF640) (DUF640) Pp06 + View
Papaver somniferum PSO017G0242 NC_039362.1 + View
Papaver somniferum PSO063G6873 NC_039364.1 + View
Populus trichocarpa Potri.013G046500 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr13 + View
Populus trichocarpa Potri.019G018600 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr19 + View
Populus trichocarpa Potri.002G037500 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr02 - View
Phaseolus vulgaris Phvul.001G161400 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr01 + View
Phaseolus vulgaris Phvul.006G105500 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr06 + View
Quercus lobata QL03p030755 3 - View
Rosa chinensis RcHm_v2.0_Chr3g0449731 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim09G0137300 chr09 + View
Striga asiatica SGA_v2.0_scaffold67G22738 scaffold67 - View
Striga asiatica SGA_v2.0_scaffold138G35223 scaffold138 - View
Salvia bowleyana SalBow6G5630 GWHASIU00000002 - View
Salix brachista Sabra13G0042600 GWHAAZH00000013 + View
Salix brachista Sabra19G0028400 GWHAAZH00000019 + View
Sechium edule Sed0012295 LG01 - View
Solanum lycopersicum Solyc05g055020.4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 (AHRD V3.3 *** A0A2G2WUJ9_CAPBA) SL4.0ch05 - View
Solanum lycopersicum Solyc04g009980.4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G3CE82_CAPCH) SL4.0ch04 + View
Schrenkiella parvula Sp3g03360 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED ch3-1 - View
Solanum pennellii Sopen04g005110 LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) Spenn-ch04 + View
Solanum pennellii Sopen05g033480 Encodes a nuclear protein that mediates light regulation of seedling development in a phytochrome-dependent manner. | LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 (LSH1) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400011497 Light-dependent short hypocotyls 1 ST4.03ch04 + View
Trochodendron aralioides TAR365G0386 group16 - View
Trochodendron aralioides TAR633G1028 group2 - View
Trochodendron aralioides TAR362G0865 group17 + View
Theobroma cacao Thecc.01G256900 IQ motif and SEC7 domain-containing protein 2 Chromosome_1 - View
Theobroma cacao Thecc.05G271300 Uncharacterized protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104827287 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like NW_010967707.1 - View
Trifolium pratense TPR.G6990 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI09G0315 NC_052245.1 - View
Tripterygium wilfordii TWI18G1178 NC_052241.1 + View
Vaccinium macrocarpon vmacro10362 Similar to LSH2: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G2067 CM024075.1 - View
Vigna mungo VMungo0720G1590 CM024071.1 + View
Vigna mungo VMungo1383G1654 CM024070.1 + View
Vitis vinifera GSVIVG01023521001 chr14 + View
Vitis vinifera GSVIVG01028348001 chr7 + View