Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL8G36050 scaffold_8 - View
Arabidopsis thaliana AT5G59560 sensitivity to red light reduced protein (SRR1) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling. SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: regulation of circadian rhythm%2C red%2C far-red light phototransduction%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like%2C SRR1 (InterPro:IPR012942)%3B Has 187 Blast hits to 182 proteins in 74 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 78%3B Fungi - 13%3B Plants - 69%3B Viruses - 0%3B Other Eukaryotes - 27 (source: NCBI BLink). SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: regulation of circadian rhythm%2C red%2C far-red light phototransduction%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like%2C SRR1 (InterPro:IPR012942)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g14002 ChrC03 + View
Brassica carinata BcaB08g36248 ChrB08 + View
Brassica carinata BcaC04g19758 ChrC04 + View
Brassica carinata BcaB05g22520 ChrB05 - View
Brassica napus A02p07060 A02 + View
Brassica napus C09p51940 C09 - View
Brassica napus C02p12410 C02 + View
Brassica napus A10p16750 A10 - View
Brassica oleracea BolC2t07341H C2 + View
Brassica oleracea BolC9t58057H C9 - View
Brassica rapa BraA02t05786Z A02 + View
Brassica rapa BraA10t43756Z A10 - View
Cardamine hirsuta CARHR273020 sensitivity to red light reduced protein (SRR1) Chr8 - View
Erigeron canadensis ECA247G0148 Conyza_canadensis_scaffold:7 - View
Eutrema salsugineum Thhalv10014282m.g KOG3131 - Uncharacterized conserved protein scaffold_2 + View
Schrenkiella parvula Sp6g21260 PTHR28626:SF3 - SRR1-LIKE PROTEIN ch6-6 - View