Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ca_17854_v3 Ca_LG6_v3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr10.1032 chr10 - View
Actinidia chinensis Actinidia01576 Lachesis_group12 - View
Actinidia chinensis Actinidia16747 Lachesis_group12 + View
Amborella trichopoda ATR1098G003 AmTr_v1.0_scaffold00092 + View
Brassica rapa BraA03t14267Z A03 - View
Beta vulgaris EL10Ac8g19611 PTHR13763:SF1 - PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOG Chr8_EL10_PGA_scaffold4 - View
Camellia sinensis var. sinensis CSS0004895 PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Vitis vinifera] Chr8 + View
Capsicum annuum CAN.G638.28 PGAv.1.6.scaffold638 - View
Capsicum annuum CAN.G36.29 PGAv.1.6.scaffold36 + View
Cannabis sativa CANSAT35G1390 NC_044378.1 + View
Corylus avellana Haze_05642 Similar to PCMP-H12: Pentatricopeptide repeat-containing protein At1g08070, chloroplastic (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc09_g08610 Putative Protein BREAST CANCER SUSCEPTIBILITY 1 homolog chr9 - View
Citrus clementina Ciclev10014038m.g scaffold_2 + View
Ceratophyllum demersum CDE10G0715 8 + View
Ceratophyllum demersum CDE04G0239 2 + View
Carpinus fangiana Cfa001034 Cfa01 - View
Cardamine hirsuta CARHR225370 Pentatricopeptide repeat-containing protein, putative Chr7 - View
Carya illinoinensis CiPaw.10G087900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 - View
Carya illinoinensis CiPaw.10G094900 K07441 - beta-1,4-N-acetylglucosaminyltransferase (ALG14) Chr10 - View
Citrullus lanatus ClCG01G025010 Pentatricopeptide repeat-containing protein CG_Chr01 + View
Cucumis melo MELO3C007093.2 protein BREAST CANCER SUSCEPTIBILITY 1 homolog chr08 - View
Cucumis sativus L. CsaV3_6G052180 Pentatricopeptide repeat-containing protein family chr6 + View
Cucumis sativus L. CsaV3_6G051350 pentatricopeptide repeat-containing protein At5g46460, mitochondrial chr6 + View
Daucus carota DCAR_007902 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_027877 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_003945 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv32221 GWHABJS00000016 + View
Davidia involucrata Dinv21493 GWHABJS00000020 - View
Eucalyptus grandis Eucgr.D00242 Chr04 - View
Erythranthe guttata Migut.M01869 scaffold_13 + View
Fragaria x ananassa FAN11G0044 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-4 - View
Fragaria x ananassa FAN24G1023 PF01535 - PPR repeat (PPR) Fvb2-2 + View
Fragaria x ananassa FAN21G2828 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-2 - View
Fragaria x ananassa FAN25G1309 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-1 + View
Fragaria vesca FvH4_3g09500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb3 + View
Fragaria vesca FvH4_3g05170 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3 + View
Gossypium hirsutum Gohir.A10G042900 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A10 - View
Glycine max Glyma.15G091951 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm15 + View
Helianthus annuus HanXRQChr04g0116411 Probable pentatricopeptide repeat (PPR) superfamily protein HanXRQChr04 + View
Lupinus albus Lalb_Chr15g0086691 K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) Lalb_Chr15 + View
Lupinus albus Lalb_Chr20g0117721 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr20 + View
Lupinus albus Lalb_Chr18g0055211 K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) Lalb_Chr18 + View
Lotus japonicus Lj2g0025150 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) chr2 + View
Lonicera japonica Lj1C1167T9 GWHAAZE00000001 - View
Lonicera japonica Lj2P311T37 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_7_26041 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Lsat_1_v8_lg_7 + View
Magnolia biondii MBI07_g30177_MAGBIO AED:0.15 Chr07 + View
Magnolia biondii MBI02_g29874_MAGBIO AED:0.01 Chr02 - View
Magnolia biondii MBI06_g04173_MAGBIO AED:0.07 Chr06 + View
Malus domestica MD10G1265600 Protein of unknown function Chr10 + View
Malus domestica MD10G1256100 breast cancer susceptibility1 Chr10 - View
Malus domestica MD05G1277200 breast cancer susceptibility1 Chr05 - View
Medicago truncatula Medtr2g018870 PPR containing plant-like protein chr2 + View
Nelumbo nucifera Nn4g26648 chr4 + View
Nelumbo nucifera Nn6g34360 chr6 - View
Nelumbo nucifera Nn3g20284 chr3 + View
Nicotiana tabacum Nitab4.5_0000315g0170 BRCT domain, Zinc finger, PHD-type, Breast cancer type 1 susceptibility protein (BRCA1) Nitab4.5_0000315 - View
Olea europaea Oeu040958.1 chr13 - View
Olea europaea Oeu019473.1 chr7 + View
Prunus persica Prupe.4G084300 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Pp04 - View
Pisum sativum Psat1g191360 PHD-like zinc-binding domain chr1LG6 - View
Populus trichocarpa Potri.001G358100 PTHR13763//PTHR13763:SF1 - BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 // PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOG Chr01 - View
Populus trichocarpa Potri.004G134300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr04 - View
Populus trichocarpa Potri.018G145510 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr18 + View
Phaseolus vulgaris Phvul.006G167200 K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) Chr06 - View
Quercus lobata QL05p055190 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0014581 RcHm_v2.0_Chr5 - View
Rosa chinensis RcHm_v2.0_Chr5g0015081 RcHm_v2.0_Chr5 + View
Striga asiatica SGA_v2.0_scaffold123G33461 scaffold123 + View
Striga asiatica SGA_v2.0_scaffold16G07750 scaffold16 + View
Salvia bowleyana SalBow8G5585 GWHASIU00000004 - View
Salix brachista Sabra04G0083800 GWHAAZH00000004 + View
Simmondsia chinensis Sc17g0004770 GWHAASQ00000017 + View
Solanum lycopersicum Solyc03g005800.4 UDP-N-acetylglucosamine transferase subunit ALG14 (AHRD V3.3 *** A0A2K3NM56_TRIPR) SL4.0ch03 + View
Schrenkiella parvula Sp7g15510 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch7-4 + View
Solanum pennellii Sopen08g008190 Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control. | breast cancer susceptibility1 (BRCA1) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: DNA repair, response to gamma radiation | LOCATED IN: intracellular, nucleus | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , BRCA1 , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type , BRCT | BEST Arabidopsis thaliana protein match is: breast cancer associated RING 1 Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400003087 Pentatricopeptide repeat-containing protein ST4.03ch02 - View
Trochodendron aralioides TAR627G0492 group6 - View
Trochodendron aralioides TAR627G0261 group6 - View
Theobroma cacao Thecc.06G146400 Pentatricopeptide repeat protein 78 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104798401 pentatricopeptide repeat-containing protein At5g04780-like NW_010967966.1 - View
Trifolium pratense TPR.G26230 Tp57577_TGAC_v2_scaf_156 - View
Tripterygium wilfordii TWI53G1773 NC_052244.1 + View
Tripterygium wilfordii TWI09G0771 NC_052245.1 + View
Utricularia gibba unitig_37.g12084 unitig_37 - View
Vigna mungo VMungo0540G0765 CM024075.1 - View
Vitis vinifera GSVIVG01021374001 chr10 + View
Vitis vinifera GSVIVG01021576001 chr10 + View