Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004688 PREDICTED: proteasome subunit alpha type-7 [Vitis vinifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G14640 LG-1 - View
Acer truncatum Atru.chr5.3304 chr5 + View
Acer truncatum Atru.chr3.841 chr3 + View
Actinidia chinensis Actinidia22957 Lachesis_group26 - View
Actinidia chinensis Actinidia17427 Lachesis_group11 + View
Arabidopsis lyrata AL8G45450 scaffold_8 + View
Arabidopsis lyrata AL5G31670 scaffold_5 + View
Avicennia marina MSTRG.20001 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.03g149040 Proteasome subunit alpha type-7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy6G02191 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D8AUH9 K02731 - 20S proteasome subunit alpha 4 (PSMA7) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QX3B7H K02731 - 20S proteasome subunit alpha 4 (PSMA7) arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT5G66140 proteasome alpha subunit D2 Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. proteasome alpha subunit D2 (PAD2)%3B FUNCTIONS IN: peptidase activity%2C endopeptidase activity%2C threonine-type endopeptidase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: proteasome core complex%2C proteasome complex%2C proteasome core complex%2C alpha-subunit complex%2C chloroplast%2C vacuole%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Proteasome%2C alpha-subunit%2C conserved site (InterPro:IPR000426)%2C Proteasome%2C subunit alpha/beta (InterPro:IPR001353)%3B BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G51260 20S proteasome alpha subunit PAD1 20S proteosomal alpha subunits. Interacts with SnRK%2C SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase. 20S proteasome alpha subunit PAD1 (PAD1)%3B FUNCTIONS IN: peptidase activity%2C endopeptidase activity%2C threonine-type endopeptidase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: in 10 components%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Proteasome%2C alpha-subunit%2C conserved site (InterPro:IPR000426)%2C Proteasome%2C subunit alpha/beta (InterPro:IPR001353)%3B BEST Arabidopsis thaliana protein match is: proteasome alpha subunit D2 (TAIR:AT5G66140.1)%3B Has 5855 Blast hits to 5853 proteins in 462 species: Archae - 847%3B Bacteria - 1%3B Metazoa - 1895%3B Fungi - 1451%3B Plants - 751%3B Viruses - 0%3B Other Eukaryotes - 910 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0712G079 AmTr_v1.0_scaffold00055 + View
Brassica carinata BcaB04g20122 ChrB04 + View
Brassica carinata BcaB01g00537 ChrB01 - View
Brassica napus A09p44290 A09 + View
Brassica napus C08p26530 C08 + View
Brassica oleracea BolC8t50267H C8 + View
Brassica rapa BraA09t39891Z A09 + View
Beta vulgaris EL10Ac6g15494 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G588.64 PGAv.1.6.scaffold588 + View
Cannabis sativa CANSAT25G3590 NC_044370.1 + View
Corylus avellana Haze_03738 Similar to Os08g0548900: Proteasome subunit alpha type-7-A (Oryza sativa subsp. japonica OX%3D39947) 2 - View
Corylus avellana Haze_02153 Similar to PAD1: Proteasome subunit alpha type-7 (Solanum lycopersicum OX%3D4081) 1 - View
Coffea canephora Cc02_g16280 Proteasome subunit alpha type-7-B chr2 - View
Citrus clementina Ciclev10029139m.g scaffold_8 - View
Citrus clementina Ciclev10026339m.g scaffold_7 - View
Ceratophyllum demersum CDE02G4234 1 - View
Ceratophyllum demersum CDE04G3614 2 - View
Carpinus fangiana Cfa006993 Cfa02 + View
Carpinus fangiana Cfa005231 Cfa02 + View
Cardamine hirsuta CARHR281600 Proteasome subunit alpha type-7-A Chr8 + View
Cardamine hirsuta CARHR160840 Proteasome subunit alpha type-7-A Chr5 + View
Carya illinoinensis CiPaw.07G060600 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Chr07 + View
Carya illinoinensis CiPaw.08G129900 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Chr08 + View
Citrullus lanatus ClCG10G000610 Proteasome subunit alpha type CG_Chr10 - View
Citrullus lanatus ClCG01G020410 Proteasome subunit alpha type CG_Chr01 + View
Cucumis melo MELO3C013757.2 Proteasome subunit alpha type chr06 - View
Cucumis melo MELO3C007920.2 Proteasome subunit alpha type chr08 + View
Corchorus olitorius COL.COLO4_22453 hypothetical protein AWUE01017970.1 + View
Carica papaya Cpa.g.sc37.150 supercontig_37 - View
Carica papaya Cpa.g.sc6.278 supercontig_6 + View
Chenopodium quinoa AUR62003349 PAD1: Proteasome subunit alpha type-7 C_Quinoa_Scaffold_1000 - View
Chenopodium quinoa AUR62029487 PAD1: Proteasome subunit alpha type-7 C_Quinoa_Scaffold_3036 + View
Capsella rubella Carub.0005s1763 K02731 - 20S proteasome subunit alpha 4 (PSMA7) scaffold_5 + View
Cucumis sativus L. CsaV3_6G047290 Proteasome subunit alpha type chr6 + View
Cucumis sativus L. CsaV3_3G000690 Proteasome subunit alpha type chr3 - View
Daucus carota DCAR_011600 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv40110 GWHABJS00000014 - View
Davidia involucrata Dinv33649 GWHABJS00000012 + View
Davidia involucrata Dinv14096 GWHABJS00000005 - View
Durio zibethinus Duzib132G0276 NW_019167915.1 - View
Durio zibethinus Duzib147G0544 NW_019168470.1 + View
Durio zibethinus Duzib264G0335 NW_019167960.1 + View
Erigeron canadensis ECA232G0366 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.I02334 Chr09 - View
Erythranthe guttata Migut.B00090 scaffold_2 - View
Erythranthe guttata Migut.N01313 scaffold_14 + View
Eutrema salsugineum Thhalv10004820m.g K02731 - 20S proteasome subunit alpha 4 (PSMA7) scaffold_6 - View
Fragaria x ananassa FAN19G1428 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Fvb1-4 - View
Fragaria x ananassa FAN26G3449 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Fvb1-2 - View
Fragaria x ananassa FAN28G1455 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Fvb1-1 + View
Fragaria x ananassa FAN23G3003 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Fvb1-3 - View
Fragaria vesca FvH4_1g11520 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Fvb1 - View
Gossypium hirsutum Gohir.A11G174100 K02731 - 20S proteasome subunit alpha 4 (PSMA7) A11 - View
Gossypium hirsutum Gohir.A03G204700 K02731 - 20S proteasome subunit alpha 4 (PSMA7) A03 + View
Gossypium hirsutum Gohir.D11G181200 K02731 - 20S proteasome subunit alpha 4 (PSMA7) D11 - View
Gossypium hirsutum Gohir.D03G008100 K02731 - 20S proteasome subunit alpha 4 (PSMA7) D03 - View
Gossypium hirsutum Gohir.A02G172000 K02731 - 20S proteasome subunit alpha 4 (PSMA7) A02 + View
Gossypium hirsutum Gohir.D02G226000 K02731 - 20S proteasome subunit alpha 4 (PSMA7) D02 + View
Glycine max Glyma.02G046400 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Gm02 - View
Glycine max Glyma.16G126200 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Gm16 - View
Gossypium raimondii Gorai.003G008300 Chr03 - View
Gossypium raimondii Gorai.007G193100 Chr07 - View
Gossypium raimondii Gorai.005G253900 Chr05 + View
Helianthus annuus HanXRQChr09g0256741 Putative proteasome alpha-subunit, N-terminal domain; Proteasome, subunit alpha/beta; Nucleophile aminohydrolases, N-terminal HanXRQChr09 + View
Helianthus annuus HanXRQChr16g0531541 Putative proteasome alpha-subunit, N-terminal domain; Proteasome, subunit alpha/beta; Nucleophile aminohydrolases, N-terminal HanXRQChr16 - View
Lupinus albus Lalb_Chr16g0391361 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Lalb_Chr16 + View
Lupinus albus Lalb_Chr05g0229771 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Lalb_Chr05 - View
Lotus japonicus Lj4g0019541 K02731 - 20S proteasome subunit alpha 4 (PSMA7) chr4 - View
Lonicera japonica Lj4A222T50 GWHAAZE00000004 + View
Lonicera japonica Lj2A479T49 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_4_145821 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Lsat_1_v8_lg_4 - View
Malus domestica MD02G1128200 proteasome alpha subunit D2 Chr02 - View
Malus domestica MD15G1243400 proteasome alpha subunit D2 Chr15 - View
Manihot esculenta Manes.04G074800 Chromosome04 - View
Medicago truncatula Medtr8g075320 proteasome subunit alpha type-7-A protein chr8 - View
Nelumbo nucifera Nn5g30758 chr5 + View
Nelumbo nucifera Nn6g32009 chr6 - View
Oryza sativa ssp. japonica Os09g0538200 Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4). chr09 + View
Petunia axillaris Peaxi162Scf00362g00836 Proteasome subunit alpha type-7 Peaxi162Scf00362 - View
Punica granatum PGR119G0595 NC_045132.1 - View
Prunus persica Prupe.7G170800 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Pp07 + View
Pisum sativum Psat4g101320 Proteasome subunit chr4LG4 - View
Papaver somniferum PSO541G5976 NC_039363.1 + View
Papaver somniferum PSO675G0433 NC_039358.1 + View
Populus trichocarpa Potri.004G174200 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Chr04 + View
Populus trichocarpa Potri.009G133800 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Chr09 + View
Phaseolus vulgaris Phvul.003G264700 K02731 - 20S proteasome subunit alpha 4 (PSMA7) Chr03 + View
Quercus lobata QL06p051000 6 + View
Quercus lobata QL11p050003 11 + View
Rosa chinensis RcHm_v2.0_Chr2g0099151 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0032400 chr08 - View
Rhododendron simsii Rhsim10G0209800 chr10 - View
Salix brachista Sabra09G0103700 GWHAAZH00000009 + View
Salix brachista Sabra04G0116200 GWHAAZH00000004 + View
Simmondsia chinensis Sc16g0002340 GWHAASQ00000016 + View
Sechium edule Sed0024543 LG14 + View
Sechium edule Sed0028012 LG10 + View
Solanum lycopersicum Solyc01g111450.3 LEY14339 proteasome, alpha subunit SL4.0ch01 + View
Schrenkiella parvula Sp5g10960 K02731 - 20S proteasome subunit alpha 4 (PSMA7) ch5-1 - View
Schrenkiella parvula Sp2g30550 K02731 - 20S proteasome subunit alpha 4 (PSMA7) ch2-4 + View
Solanum pennellii Sopen01g053510 Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo), Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. | proteasome alpha subunit D2 (PAD2) | FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site , Proteasome, subunit alpha/beta | BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400006193 Proteasome subunit alpha type ST4.03ch01 + View
Selenicereus undatus Hund14057 Scaffold_33679 + View
Trochodendron aralioides TAR376G0640 group14 + View
Trochodendron aralioides TAR628G0242 group5 + View
Trochodendron aralioides TAR381G1163 group11 - View
Theobroma cacao Thecc.02G061500 20S proteasome alpha subunit PAD1 Chromosome_2 - View
Theobroma cacao Thecc.01G015500 Proteasome alpha subunit D2 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104819170 proteasome subunit alpha type-7 NW_010966177.1 - View
Trifolium pratense TPR.G19484 Tp57577_TGAC_v2_LG4 - View
Trifolium pratense TPR.G25817 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI09G1023 NC_052245.1 - View
Tripterygium wilfordii TWI73G0579 NC_052232.1 + View
Vaccinium macrocarpon vmacro22146 Similar to PAD1: Proteasome subunit alpha type-7 (Cicer arietinum OX%3D3827) scaffold00308_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G1739 CM024069.1 + View
Vitis vinifera GSVIVG01024037001 chr3 + View
Vitis vinifera GSVIVG01018748001 chr4 + View
Zea mays Zm00001eb332040 Zm00001e035996 Proteasome subunit alpha type 7 - View
Zea mays Zm00001eb202760 Zm00001e024689 Proteasome subunit alpha type 4 + View