Gene: AT3G51260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G51260
  • Transcript Identifier AT3G51260.1
  • Gene Type Coding gene
  • Location Chr3 : 19031086-19032746 : positive

Gene Family Information

  • ID HOM05D000276
  • #Genes/#Species 1584/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G51260.1
  • symbol PAD1
  • full_name 20S proteasome alpha subunit PAD1
  • uniprot P30186

Descriptions

  • Description 20S proteasome alpha subunit PAD1
  • Computational description 20S proteasome alpha subunit PAD1 (PAD1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome alpha subunit D2 (TAIR:AT5G66140.1); Has 5855 Blast hits to 5853 proteins in 462 species: Archae - 847; Bacteria - 1; Metazoa - 1895; Fungi - 1451; Plants - 751; Viruses - 0; Other Eukaryotes - 910 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010498
IBA
Gene Ontologyproteasomal protein catabolic process1
GO:0051603
IEA
GOA Databaseproteolysis involved in cellular protein catabolic process
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0006511
TAS, IEA
Gene Ontologyubiquitin-dependent protein catabolic process2
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0009700
IMP
Gene Ontologyindole phytoalexin biosynthetic process3
GO:0042742
IMP
Gene Ontologydefense response to bacterium3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol5
GO:0019773
IEA
GOA Databaseproteasome core complex, alpha-subunit complex
GO:0019773
ISS, IBA
NAS
Gene Ontologyproteasome core complex, alpha-subunit complex1
GO:0019773
IEA
InterProproteasome core complex, alpha-subunit complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
IBA
Gene Ontologynucleus1 4
GO:0005839
IEA
GOA Databaseproteasome core complex
GO:0005839
IBA
TAS
Gene Ontologyproteasome core complex1 6
GO:0005839
IEA
InterProproteasome core complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole7
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome8
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0000502
IDA
Gene Ontologyproteasome complex9
GO:0009524
IDA
Gene Ontologyphragmoplast4
GO:0005575
ND
Gene Ontologycellular_component
GO:0005819
IDA
Gene Ontologyspindle4
GO:0000325
HDA
Gene Ontologyplant-type vacuole10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001353 Proteasome, subunit alpha/beta
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR000426 Proteasome alpha-subunit, N-terminal domain
Mapman id Description
19.2.5.1.1.4 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-4