Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G7840 LG-7 + View
Acer truncatum Atru.chr11.1971 chr11 - View
Actinidia chinensis Actinidia27771 Lachesis_group10 - View
Arabidopsis lyrata AL1G37810 scaffold_1 + View
Arabidopsis lyrata AL2G29520 scaffold_2 - View
Avicennia marina MSTRG.614 ScioBoG_102831_HRSCAF_103044 + View
Aquilegia oxysepala Aqoxy3G03072 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GIV1JF PTHR13542:SF0 - PROTEIN LSM12 HOMOLOG arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G4BVC6 KOG4401 - Uncharacterized conserved protein arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT1G70220 RNA-processing, Lsm domain-containing protein RNA-processing%2C Lsm domain%3B CONTAINS InterPro DOMAIN/s: RNA-processing%2C Lsm domain (InterPro:IPR019181)%3B BEST Arabidopsis thaliana protein match is: RNA-processing%2C Lsm domain (TAIR:AT1G24050.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G24050 RNA-processing, Lsm domain-containing protein RNA-processing%2C Lsm domain%3B CONTAINS InterPro DOMAIN/s: RNA-processing%2C Lsm domain (InterPro:IPR019181)%3B BEST Arabidopsis thaliana protein match is: RNA-processing%2C Lsm domain (TAIR:AT1G70220.1)%3B Has 228 Blast hits to 228 proteins in 109 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 90%3B Fungi - 53%3B Plants - 56%3B Viruses - 0%3B Other Eukaryotes - 29 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR1149G050 AmTr_v1.0_scaffold00088 + View
Brassica carinata BcaB05g24540 ChrB05 - View
Brassica carinata BcaC05g26302 ChrC05 + View
Brassica carinata BcaB07g32379 ChrB07 + View
Brassica napus C02p27410 C02 - View
Brassica oleracea BolC2t08801H C2 - View
Brassica oleracea BolC5t31020H C5 + View
Brassica rapa BraA09t39575Z A09 - View
Beta vulgaris EL10Ac6g13619 PF09793 - Anticodon-binding domain (AD) Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G1514 NC_044373.1 - View
Cicer arietinum L. Ca_22770_v3 Ca_LG7_v3 + View
Corylus avellana Haze_12160 Protein of unknown function 9 + View
Coffea canephora Cc11_g14330 Putative Protein LSM12 homolog A chr11 - View
Citrus clementina Ciclev10032867m.g scaffold_4 + View
Carpinus fangiana Cfa009129 Cfa03 + View
Cardamine hirsuta CARHR063340 RNA-processing, Lsm domain Chr2 - View
Cardamine hirsuta CARHR024350 LSM12-like protein Chr1 + View
Carya illinoinensis CiPaw.05G149300 KOG4401 - Uncharacterized conserved protein Chr05 + View
Citrullus lanatus ClCG05G025100 LSM12-like protein CG_Chr05 - View
Cucumis melo MELO3C012019.2 protein LSM12 homolog A chr10 - View
Carica papaya Cpa.g.sc5.359 supercontig_5 - View
Chenopodium quinoa AUR62005318 Protein of unknown function C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0001s2347 KOG4401 - Uncharacterized conserved protein scaffold_1 + View
Capsella rubella Carub.0002s1692 KOG4401 - Uncharacterized conserved protein scaffold_2 - View
Cucumis sativus L. CsaV3_5G031800 protein LSM12 homolog chr5 + View
Daucus carota DCAR_007099 hypothetical protein DCARv2_Chr2 - View
Durio zibethinus Duzib268G0446 NW_019168270.1 - View
Durio zibethinus Duzib248G0500 NW_019168048.1 + View
Eucalyptus grandis Eucgr.B02549 Chr02 + View
Erythranthe guttata Migut.E00145 scaffold_5 - View
Eutrema salsugineum Thhalv10019170m.g KOG4401 - Uncharacterized conserved protein scaffold_9 + View
Eutrema salsugineum Thhalv10009785m.g KOG4401 - Uncharacterized conserved protein scaffold_5 - View
Fragaria x ananassa FAN12G2936 KOG4401 - Uncharacterized conserved protein Fvb4-3 - View
Fragaria x ananassa FAN22G1244 PTHR13542//PTHR13542:SF0 - UNCHARACTERIZED // PROTEIN LSM12 HOMOLOG Fvb4-1 + View
Fragaria x ananassa FAN17G0007 PTHR13542//PTHR13542:SF0 - UNCHARACTERIZED // PROTEIN LSM12 HOMOLOG Fvb4-2 - View
Fragaria x ananassa FAN07G0314 KOG4401 - Uncharacterized conserved protein Fvb4-4 - View
Fragaria vesca FvH4_4g34930 PTHR13542:SF0 - PROTEIN LSM12 HOMOLOG Fvb4 + View
Glycine max Glyma.18G133800 PTHR13542:SF0 - PROTEIN LSM12 HOMOLOG Gm18 - View
Glycine max Glyma.08G290400 KOG4401 - Uncharacterized conserved protein Gm08 + View
Lonicera japonica Lj3A1049G57 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_4_6340 KOG4401 - Uncharacterized conserved protein Lsat_1_v8_lg_4 + View
Malus domestica MD13G1087800 RNA-processing Chr13 - View
Malus domestica MD16G1088100 RNA-processing Chr16 - View
Manihot esculenta Manes.01G197300 Chromosome01 - View
Medicago truncatula Medtr8g063230 anticodon-binding domain protein chr8 - View
Nelumbo nucifera Nn4g22873 chr4 + View
Olea europaea Oeu039485.1 chr12 + View
Oryza sativa ssp. japonica Os02g0741900 Similar to T23E23.20. chr02 - View
Punica granatum PGR119G0379 NC_045132.1 - View
Prunus persica Prupe.1G258500 PF09793 - Anticodon-binding domain (AD) Pp01 + View
Pisum sativum Psat4g125480 Anticodon-binding domain chr4LG4 + View
Papaver somniferum PSO017G3562 NC_039362.1 + View
Populus trichocarpa Potri.010G095601 KOG4401 - Uncharacterized conserved protein Chr10 - View
Populus trichocarpa Potri.008G146200 PTHR13542:SF0 - PROTEIN LSM12 HOMOLOG Chr08 + View
Quercus lobata QL03p062286 3 + View
Rosa chinensis RcHm_v2.0_Chr4g0444371 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0048500 chr12 + View
Striga asiatica SGA_v2.0_scaffold166G38348 scaffold166 - View
Salix brachista Sabra10G0068200 GWHAAZH00000010 - View
Simmondsia chinensis Sc04g0008930 GWHAASQ00000004 - View
Sechium edule Sed0020204 LG06 - View
Schrenkiella parvula Sp5g25350 KOG4401 - Uncharacterized conserved protein ch5-6 - View
Schrenkiella parvula Sp1g21380 KOG4401 - Uncharacterized conserved protein ch1-1 + View
Selenicereus undatus Hund05960 Scaffold_19641 - View
Trochodendron aralioides TAR374G1061 group12 - View
Trochodendron aralioides TAR622G1169 group8 - View
Theobroma cacao Thecc.02G243600 RNA-processing Chromosome_2 - View
Tarenaya hassleriana THA.LOC104808902 uncharacterized protein LOC104808902 NW_010960187.1 - View
Tripterygium wilfordii TWI18G1303 NC_052241.1 - View
Vaccinium macrocarpon vmacro22616 Protein of unknown function chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01020163001 chr1 - View
Zea mays Zm00001eb254250 Zm00001e015789 5 - View