Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0002855 hypothetical protein PHAVU_001G089100g [Phaseolus vulgaris] Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G5580 LG-2 + View
Acer truncatum Atru.chr6.2597 chr6 + View
Acer truncatum Atru.chr11.2373 chr11 + View
Actinidia chinensis Actinidia36216 Lachesis_group4 - View
Actinidia chinensis Actinidia05888 Lachesis_group11 - View
Arabidopsis lyrata AL5G16030 scaffold_5 - View
Avicennia marina MSTRG.479 ScioBoG_102831_HRSCAF_103044 - View
Amaranthus hybridus Ah.02g130980 AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.03g148160 AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy5G03265 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KNN8RN PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XF5UIG PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT3G27010 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1%3B1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain family protein 20 (TCP20)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1)%3B Has 543 Blast hits to 539 proteins in 120 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 2%3B Fungi - 0%3B Plants - 525%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G41030 TCP family transcription factor TCP family transcription factor %3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain family protein 20 (TAIR:AT3G27010.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB07g30197 ChrB07 + View
Brassica carinata BcaC04g23912 ChrC04 - View
Brassica carinata BcaC06g33868 ChrC06 + View
Brassica carinata BcaC06g31027 ChrC06 + View
Brassica napus A04p14070 A04 + View
Brassica napus A09p03240 A09 - View
Brassica napus A02p34980 A02 - View
Brassica napus A06p41550 A06 + View
Brassica napus C09p03440 C09 - View
Brassica napus C07p36110 C07 - View
Brassica napus C04p48100 C04 + View
Brassica oleracea BolC7t44125H C7 - View
Brassica oleracea BolC4t26401H C4 + View
Brassica oleracea BolC9t53265H C9 - View
Brassica rapa BraA06t27080Z A06 + View
Brassica rapa BraA04t17068Z A04 + View
Brassica rapa BraA09t35962Z A09 - View
Brassica rapa BraA02t08506Z A02 - View
Beta vulgaris EL10Ac6g13542 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Chr6_EL10_PGA_scaffold0 + View
Beta vulgaris EL10Ac6g15439 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G473.122 PGAv.1.6.scaffold473 + View
Cannabis sativa CANSAT64G1794 NC_044379.1 - View
Cannabis sativa CANSAT01G0916 NC_044373.1 - View
Corylus avellana Haze_14898 Similar to TCP20: Transcription factor TCP20 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_12453 Similar to TCP20: Transcription factor TCP20 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g17270 Transcription factor TCP20 chr11 + View
Coffea canephora Cc07_g01000 Transcription factor TCP20 chr7 + View
Citrus clementina Ciclev10032374m.g scaffold_4 - View
Citrus clementina Ciclev10015977m.g scaffold_2 - View
Carpinus fangiana Cfa007207 Cfa03 - View
Carpinus fangiana Cfa009393 Cfa03 + View
Cardamine hirsuta CARHR213340 TCP family transcription factor Chr7 - View
Cardamine hirsuta CARHR148200 TCP transcription factor 18 Chr5 - View
Carya illinoinensis CiPaw.06G105800 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr06 + View
Carya illinoinensis CiPaw.03G058100 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr03 + View
Carya illinoinensis CiPaw.04G039400 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Chr04 + View
Carya illinoinensis CiPaw.05G106400 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr05 - View
Citrullus lanatus ClCG05G013720 TCP family transcription factor family protein CG_Chr05 + View
Citrullus lanatus ClCG06G001980 TCP family transcription factor family protein CG_Chr06 - View
Cucumis melo MELO3C014903.2 transcription factor TCP20 chr06 - View
Cucumis melo MELO3C022331.2 transcription factor TCP20-like chr11 + View
Corchorus olitorius COL.COLO4_13292 Transcription factor%2C TCP AWUE01015149.1 + View
Carica papaya Cpa.g.sc70.118 supercontig_70 - View
Chenopodium quinoa AUR62005656 TCP20: Transcription factor TCP20 C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62029424 TCP20: Transcription factor TCP20 C_Quinoa_Scaffold_3036 + View
Chenopodium quinoa AUR62003417 TCP20: Transcription factor TCP20 C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62028897 TCP20: Transcription factor TCP20 C_Quinoa_Scaffold_2837 - View
Capsella rubella Carub.0005s0520 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED scaffold_5 - View
Capsella rubella Carub.0007s3446 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_6G008050 transcription factor TCP20-like chr6 - View
Cucumis sativus L. CsaV3_3G026870 transcription factor TCP20 chr3 - View
Daucus carota DCAR_014495 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv33322 GWHABJS00000014 - View
Davidia involucrata Dinv25646 GWHABJS00000012 + View
Durio zibethinus Duzib264G0804 NW_019167960.1 - View
Durio zibethinus Duzib187G1441 NW_019167860.1 - View
Durio zibethinus Duzib147G0245 NW_019168470.1 + View
Erigeron canadensis ECA232G2119 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G1950 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.B03529 Chr02 + View
Erythranthe guttata Migut.F00047 scaffold_6 - View
Eutrema salsugineum Thhalv10028073m.g PTHR31072:SF7 - TRANSCRIPTION FACTOR TCP21-RELATED scaffold_14 - View
Eutrema salsugineum Thhalv10004391m.g PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED scaffold_6 + View
Fragaria x ananassa FAN14G4523 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Fvb6-1 - View
Fragaria x ananassa FAN09G2515 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Fvb6-2 - View
Fragaria x ananassa FAN05G4127 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Fvb6-3 - View
Fragaria x ananassa FAN02G1392 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Fvb6-4 + View
Fragaria vesca FvH4_6g53830 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Fvb6 + View
Gossypium hirsutum Gohir.A10G071300 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED A10 - View
Gossypium hirsutum Gohir.A05G336700 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED A05 - View
Gossypium hirsutum Gohir.A09G037265 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED A09 - View
Gossypium hirsutum Gohir.D10G079800 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED D10 + View
Gossypium hirsutum Gohir.D09G038300 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED D09 + View
Gossypium hirsutum Gohir.D04G075200 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED D04 - View
Gossypium hirsutum Gohir.A07G230200 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED A07 + View
Glycine max Glyma.16G053900 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Gm16 - View
Glycine max Glyma.19G095300 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Gm19 + View
Gossypium raimondii Gorai.006G043800 Chr06 + View
Gossypium raimondii Gorai.001G273300 Chr01 + View
Gossypium raimondii Gorai.012G084600 Chr12 - View
Gossypium raimondii Gorai.011G086900 Chr11 + View
Helianthus annuus HanXRQChr07g0198131 Putative transcription factor, TCP HanXRQChr07 - View
Lupinus albus Lalb_Chr00c01g0403801 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Lalb_Chr00c01 + View
Lupinus albus Lalb_Chr22g0360271 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Lalb_Chr22 + View
Lotus japonicus Lj1g0021676 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED chr1 - View
Lonicera japonica Lj7P611T37 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_2_94320 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Lsat_1_v8_lg_2 + View
Malus domestica MD17G1002500 TEOSINTE BRANCHED 1 Chr17 + View
Malus domestica MD13G1122900 TEOSINTE BRANCHED 1 Chr13 + View
Malus domestica MD09G1008300 TEOSINTE BRANCHED 1 Chr09 - View
Manihot esculenta Manes.11G083000 Chromosome11 - View
Manihot esculenta Manes.12G007700 Chromosome12 - View
Medicago truncatula Medtr7g028160 TCP family transcription factor chr7 - View
Nelumbo nucifera Nn4g22245 chr4 - View
Nicotiana tabacum Nitab4.5_0000519g0050 Transcription factor, TCP, Transcription factor TCP subgroup Nitab4.5_0000519 + View
Nicotiana tabacum Nitab4.5_0007375g0060 Transcription factor TCP subgroup, Transcription factor, TCP Nitab4.5_0007375 - View
Nicotiana tabacum Nitab4.5_0003376g0090 Transcription factor TCP subgroup, Transcription factor, TCP Nitab4.5_0003376 + View
Olea europaea Oeu035242.1 chr17 - View
Oryza sativa ssp. japonica Os01g0924400 Similar to Auxin-induced basic helix-loop-helix transcription factor. chr01 + View
Petunia axillaris Peaxi162Scf00128g01526 TCP family transcription factor Peaxi162Scf00128 + View
Petunia axillaris Peaxi162Scf00420g00064 TCP family transcription factor Peaxi162Scf00420 + View
Punica granatum PGR102G0616 NC_045129.1 - View
Punica granatum PGR083G1592 NC_045133.1 + View
Prunus persica Prupe.1G222000 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Pp01 - View
Prunus persica Prupe.3G308700 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Pp03 + View
Papaver somniferum PSO017G0744 NC_039362.1 - View
Populus trichocarpa Potri.017G068748 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr17 + View
Populus trichocarpa Potri.003G167900 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr03 - View
Populus trichocarpa Potri.001G327100 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr01 - View
Quercus lobata QL02p070859 CM012294 - View
Quercus lobata QL03p051355 3 - View
Rosa chinensis RcHm_v2.0_Chr2g0175971 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0041600 chr08 - View
Rhododendron simsii Rhsim10G0004700 chr10 - View
Striga asiatica SGA_v2.0_scaffold253G45181 scaffold253 - View
Salvia bowleyana SalBow2G3330 GWHASIU00000007 + View
Salvia bowleyana SalBow4G0055 GWHASIU00000008 - View
Salix brachista Sabra16G0209500 GWHAAZH00000016 - View
Salix brachista Sabra01G0043000 GWHAAZH00000001 + View
Simmondsia chinensis Sc04g0000520 GWHAASQ00000004 - View
Simmondsia chinensis Sc03g0006340 GWHAASQ00000003 - View
Sechium edule Sed0024351 LG06 - View
Sechium edule Sed0004207 LG07 + View
Sechium edule Sed0026026 LG09 - View
Sechium edule Sed0020156 LG08 + View
Sapria himalayana SHI04037 scaffold6_19132642 - View
Solanum lycopersicum Solyc02g068200.1 TCP transcription factor 18 SL4.0ch02 + View
Solanum lycopersicum Solyc02g094290.1 TCP transcription factor 27 SL4.0ch02 + View
Schrenkiella parvula Sp2g16130 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED ch2-4 - View
Schrenkiella parvula Sp7g00880 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED ch7-1 - View
Solanum pennellii Sopen02g038930 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1, 1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (TCP20) | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TCP family transcription factor Spenn-ch02 + View
Solanum pennellii Sopen02g017300 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1, 1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (TCP20) | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TCP family transcription factor Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400020247 Transcription factor ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400040232 Transcription factor ST4.03ch02 + View
Trochodendron aralioides TAR374G0904 group12 + View
Trochodendron aralioides TAR622G0201 group8 + View
Trochodendron aralioides TAR629G0902 group0 - View
Theobroma cacao Thecc.02G200900 Teosinte branched 1 Chromosome_2 - View
Theobroma cacao Thecc.04G040300 Teosinte branched 1 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104825633 LOW QUALITY PROTEIN: transcription factor TCP20 NW_010967498.1 + View
Tarenaya hassleriana THA.LOC104823985 transcription factor TCP20-like NW_010966881.1 + View
Tarenaya hassleriana THA.LOC104805322 transcription factor TCP20-like NW_010961290.1 - View
Trifolium pratense TPR.G8574 Tp57577_TGAC_v2_scaf_296 - View
Tripterygium wilfordii TWI34G1853 NC_052235.1 - View
Tripterygium wilfordii TWI18G0336 NC_052241.1 + View
Tripterygium wilfordii TWI36G0943 NC_052237.1 - View
Tripterygium wilfordii TWI60G1078 NC_052246.1 + View
Vaccinium macrocarpon vmacro18359 Similar to TCP20: Transcription factor TCP20 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3709 CM024070.1 - View
Zea mays Zm00001eb142960 Zm00001e018800 TCP transcription factor Transcription factor TCP11 3 - View