Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G7120 LG-11 - View
Acer truncatum Atru.chr8.1454 chr8 + View
Actinidia chinensis Actinidia05405 Lachesis_group5 - View
Arabidopsis lyrata AL6G16110 scaffold_6 - View
Aquilegia oxysepala Aqoxy2G01075 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XB6NYF K17917 - sorting nexin-1/2 (SNX1_2) arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3C6LBG K17917 - sorting nexin-1/2 (SNX1_2) arahy.Tifrunner.gnm1.Arahy.12 + View
Arabidopsis thaliana AT5G06140 sorting nexin 1 Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2%2C BOR1 and BRI1. sorting nexin 1 (SNX1)%3B FUNCTIONS IN: phosphoinositide binding%3B INVOLVED IN: in 7 processes%3B LOCATED IN: endosome%2C microsome%2C retromer complex%2C membrane%2C multivesicular body%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404)%2C Phox-like (InterPro:IPR001683)%3B BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g32323 ChrC06 - View
Brassica carinata BcaC06g32586 ChrC06 - View
Brassica napus C09p70690 C09 + View
Brassica napus A10p30280 A10 + View
Brassica oleracea BolC9t59825H C9 + View
Brassica rapa BraA10t45066Z A10 + View
Beta vulgaris EL10Ac7g16880 PTHR10555//PTHR10555:SF122 - SORTING NEXIN // SORTING NEXIN 1 Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G397.82 PGAv.1.6.scaffold397 - View
Cannabis sativa CANSAT64G2405 NC_044379.1 - View
Corylus avellana Haze_19646 Similar to SNX1: Sorting nexin 1 (Arabidopsis thaliana OX%3D3702) 10 - View
Citrus clementina Ciclev10013553m.g scaffold_6 + View
Ceratophyllum demersum CDE06G1014 4 + View
Ceratophyllum demersum CDE08G1477 6 - View
Carpinus fangiana Cfa016640 Cfa07 - View
Cardamine hirsuta CARHR206850 sorting nexin 1 Chr6 - View
Carya illinoinensis CiPaw.09G016600 K17917 - sorting nexin-1/2 (SNX1_2) Chr09 - View
Citrullus lanatus ClCG04G010170 Sorting nexin 3, putative CG_Chr04 - View
Cucumis melo MELO3C024558.2 sorting nexin 1 chr08 + View
Carica papaya Cpa.g.sc104.100 supercontig_104 + View
Chenopodium quinoa AUR62006221 SNX1: Sorting nexin 1 C_Quinoa_Scaffold_1001 - View
Capsella rubella Carub.0006s0502 K17917 - sorting nexin-1/2 (SNX1_2) scaffold_6 - View
Cucumis sativus L. CsaV3_6G040790 sorting nexin 1 chr6 - View
Daucus carota DCAR_013410 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv21174 GWHABJS00000021 + View
Davidia involucrata Dinv31714 GWHABJS00000015 - View
Durio zibethinus Duzib093G1682 NW_019167937.1 + View
Durio zibethinus Duzib106G2047 NW_019168492.1 + View
Erigeron canadensis ECA248G2482 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.A02640 Chr01 + View
Erythranthe guttata Migut.J01005 scaffold_10 + View
Eutrema salsugineum Thhalv10013711m.g K17917 - sorting nexin-1/2 (SNX1_2) scaffold_2 - View
Fragaria x ananassa FAN14G5731 K17917 - sorting nexin-1/2 (SNX1_2) Fvb6-1 + View
Fragaria x ananassa FAN02G1643 K17917 - sorting nexin-1/2 (SNX1_2) Fvb6-4 - View
Fragaria x ananassa FAN05G1205 K17917 - sorting nexin-1/2 (SNX1_2) Fvb6-3 + View
Fragaria vesca FvH4_6g19371 Fvb6 - View
Gossypium hirsutum Gohir.A04G048400 K17917 - sorting nexin-1/2 (SNX1_2) A04 - View
Gossypium hirsutum Gohir.A09G141200 K17917 - sorting nexin-1/2 (SNX1_2) A09 - View
Gossypium hirsutum Gohir.D04G097400 K17917 - sorting nexin-1/2 (SNX1_2) D04 + View
Gossypium hirsutum Gohir.D09G133500 K17917 - sorting nexin-1/2 (SNX1_2) D09 + View
Glycine max Glyma.02G201400 K17917 - sorting nexin-1/2 (SNX1_2) Gm02 + View
Glycine max Glyma.10G075200 K17917 - sorting nexin-1/2 (SNX1_2) Gm10 - View
Gossypium raimondii Gorai.006G153000 Chr06 + View
Gossypium raimondii Gorai.009G400000 Chr09 + View
Helianthus annuus HanXRQChr01g0010191 Probable sorting nexin 1 HanXRQChr01 + View
Lupinus albus Lalb_Chr02g0154801 K17917 - sorting nexin-1/2 (SNX1_2) Lalb_Chr02 + View
Lotus japonicus Lj5g0026419 K17917 - sorting nexin-1/2 (SNX1_2) chr5 + View
Lonicera japonica Lj2A142G15 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_165621 Lsat_1_v8_lg_5 - View
Malus domestica MD14G1029900 sorting nexin 1 Chr14 - View
Malus domestica MD12G1029600 sorting nexin 1 Chr12 - View
Manihot esculenta Manes.09G053000 Chromosome09 + View
Medicago truncatula Medtr1g059650 sorting nexin 2B chr1 + View
Nelumbo nucifera Nn2g14214 chr2 - View
Nelumbo nucifera Nn6g34827 chr6 + View
Nicotiana tabacum Nitab4.5_0001875g0030 Phox homologous domain, Vps5 C-terminal Nitab4.5_0001875 + View
Petunia axillaris Peaxi162Scf00069g00611 sorting nexin 1 Peaxi162Scf00069 + View
Prunus persica Prupe.7G102200 Pp07 + View
Papaver somniferum PSO801G0294 NW_020628818.1 - View
Populus trichocarpa Potri.006G209600 K17917 - sorting nexin-1/2 (SNX1_2) Chr06 + View
Populus trichocarpa Potri.016G076400 K17917 - sorting nexin-1/2 (SNX1_2) Chr16 + View
Quercus lobata QL07p038312 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0474681 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0070200 chr03 + View
Salvia bowleyana SalBow3G0486 GWHASIU00000006 + View
Salix brachista Sabra16G0079100 GWHAAZH00000016 + View
Salix brachista Sabra06G0161500 GWHAAZH00000006 + View
Simmondsia chinensis Sc02g0000440 GWHAASQ00000002 + View
Solanum lycopersicum Solyc09g010130.4 Sorting nexin 1-like protein (AHRD V3.3 *** A0A0K0XR75_TOBAC) SL4.0ch09 - View
Schrenkiella parvula Sp6g36750 K17917 - sorting nexin-1/2 (SNX1_2) ch6-6 + View
Solanum pennellii Sopen09g004870 Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1. | sorting nexin 1 (SNX1) | FUNCTIONS IN: phosphoinositide binding | INVOLVED IN: in 7 processes | LOCATED IN: endosome, microsome, retromer complex, membrane, multivesicular body | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Vps5 C-terminal , Phox-like | BEST Arabidopsis thaliana protein match is: sorting nexin 2B Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400008862 Sorting nexin 3 ST4.03ch09 + View
Selenicereus undatus Hund19900 Scaffold_33673 + View
Trochodendron aralioides TAR623G1340 group7 - View
Trochodendron aralioides TAR633G0805 group2 + View
Theobroma cacao Thecc.05G094200 Sorting nexin 1 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104816597 sorting nexin 1 NW_010965775.1 - View
Trifolium pratense TPR.G14792 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI74G0814 NC_052234.1 - View
Tripterygium wilfordii TWI77G0075 NC_052236.1 + View
Vaccinium macrocarpon vmacro07442 Similar to SNX1: Sorting nexin 1 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01033883001 chr8 + View