Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0026500 PREDICTED: cyclic dof factor 2 [Vitis vinifera] Chr2 + View
CSS0027296 Dof zinc finger protein [Morus notabilis] Chr6 + View
CSS0040871 PREDICTED: cyclic dof factor 2 [Vitis vinifera] Contig780 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.1769 chr11 - View
Acer truncatum Atru.chr8.186 chr8 + View
Actinidia chinensis Actinidia33203 Lachesis_group12 + View
Actinidia chinensis Actinidia38770 Lachesis_group4 + View
Actinidia chinensis Actinidia12288 Lachesis_group4 + View
Actinidia chinensis Actinidia38790 Contig02207_ERROPOS181165+ + View
Avicennia marina MSTRG.23929 ScioBoG_3895_HRSCAF_3912 - View
Arabidopsis thaliana AT5G39660 cycling DOF factor 2 Dof-type zinc finger domain-containing protein%2C identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1%2C but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2 (CDF2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1)%3B Has 1150 Blast hits to 1134 proteins in 76 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 18%3B Fungi - 6%3B Plants - 1095%3B Viruses - 0%3B Other Eukaryotes - 25 (source: NCBI BLink). cycling DOF factor 2 (CDF2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0564G304 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaB07g29834 ChrB07 - View
Brassica carinata BcaC08g46398 ChrC08 - View
Brassica carinata BcaB06g27356 ChrB06 + View
Brassica napus A07p35930 A07 - View
Beta vulgaris EL10Ac5g11029 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G206.160 PGAv.1.6.scaffold206 + View
Cannabis sativa CANSAT64G2040 NC_044379.1 + View
Cicer arietinum L. Ca_04287_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_02906_v3 Ca_LG1_v3 - View
Corylus avellana Haze_11999 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_14515 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc07_g03470 Putative Dof zinc finger protein DOF5.2 chr7 + View
Coffea canephora Cc04_g16510 Putative Dof zinc finger protein DOF3.3 chr4 - View
Coffea canephora Cc11_g12870 Putative Dof zinc finger protein DOF5.2 chr11 - View
Citrus clementina Ciclev10011556m.g scaffold_6 + View
Carpinus fangiana Cfa007571 Cfa03 + View
Carpinus fangiana Cfa008968 Cfa03 - View
Carpinus fangiana Cfa018933 Cfa08 - View
Carya illinoinensis CiPaw.04G016400 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr04 - View
Cucumis melo MELO3C009859.2 cyclic dof factor 2 chr04 - View
Cucumis melo MELO3C012104.2 cyclic dof factor 1 chr10 - View
Cucumis melo MELO3C001987.2 cyclic dof factor 3 chr12 - View
Carica papaya Cpa.g.sc111.11 supercontig_111 + View
Chenopodium quinoa AUR62034427 CDF2: Cyclic dof factor 2 C_Quinoa_Scaffold_2742 + View
Chenopodium quinoa AUR62039802 CDF2: Cyclic dof factor 2 C_Quinoa_Scaffold_1828 + View
Capsella rubella Carub.0007s3629 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_1G005540 cyclic dof factor 3 chr1 + View
Cucumis sativus L. CsaV3_3G041310 cyclic dof factor 2 chr3 + View
Davidia involucrata Dinv33771 GWHABJS00000014 + View
Davidia involucrata Dinv16658 GWHABJS00000018 + View
Davidia involucrata Dinv11522 GWHABJS00000012 + View
Davidia involucrata Dinv34143 GWHABJS00000008 - View
Durio zibethinus Duzib251G0890 NW_019167971.1 - View
Durio zibethinus Duzib147G1585 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019168470.1 - View
Durio zibethinus Duzib264G0349 NW_019167960.1 + View
Erigeron canadensis ECA246G3081 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B00515 Chr02 + View
Erythranthe guttata Migut.L01278 scaffold_12 - View
Erythranthe guttata Migut.D01811 scaffold_4 - View
Fragaria x ananassa FAN02G2712 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb6-4 + View
Fragaria x ananassa FAN05G2059 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb6-3 - View
Fragaria x ananassa FAN14G0745 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb6-1 + View
Fragaria x ananassa FAN22G0153 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-1 - View
Fragaria x ananassa FAN17G2154 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-2 + View
Fragaria x ananassa FAN12G2237 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-3 + View
Fragaria x ananassa FAN09G4386 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb6-2 - View
Fragaria vesca FvH4_5g14830 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb5 - View
Fragaria vesca FvH4_6g48270 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb6 - View
Gossypium hirsutum Gohir.D11G073900 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D11 + View
Gossypium hirsutum Gohir.A11G070000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED A11 + View
Gossypium hirsutum Gohir.A09G014900 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED A09 - View
Gossypium hirsutum Gohir.D12G180500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D12 + View
Glycine max Glyma.18G260500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm18 + View
Glycine max Glyma.20G035200 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm20 - View
Glycine max Glyma.02G108600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm02 + View
Glycine max Glyma.13G062500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm13 - View
Gossypium raimondii Gorai.006G015500 Chr06 - View
Gossypium raimondii Gorai.007G079300 Chr07 + View
Lotus japonicus Lj2g0003484 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr2 + View
Lotus japonicus Lj1g0022885 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr1 - View
Lonicera japonica Lju41C11G7 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_5_19880 PTHR31089:SF1 - CYCLIC DOF FACTOR 4-RELATED Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_1_14020 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_4_108141 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lsat_1_v8_lg_4 + View
Malus domestica MD13G1070600 cycling DOF factor 2 Chr13 - View
Manihot esculenta Manes.05G103100 Chromosome05 + View
Manihot esculenta Manes.01G092100 Chromosome01 + View
Manihot esculenta Manes.01G035000 Chromosome01 - View
Manihot esculenta Manes.02G047133 Chromosome02 + View
Medicago truncatula Medtr6g012450 DOF-type zinc finger DNA-binding family protein chr6 + View
Medicago truncatula Medtr7g010950 DOF-type zinc finger DNA-binding family protein chr7 + View
Nelumbo nucifera Nn4g23198 chr4 + View
Petunia axillaris Peaxi162Scf00129g10011 Dof-type zinc finger DNA-binding family protein Peaxi162Scf00129 - View
Prunus persica Prupe.1G276000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Pp01 + View
Prunus persica Prupe.3G266200 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Pp03 - View
Pisum sativum Psat3g197760 Dof domain + zinc finger chr3LG5 + View
Papaver somniferum PSO478G3373 NC_039361.1 + View
Populus trichocarpa Potri.008G087800 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr08 + View
Populus trichocarpa Potri.010G167600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr10 - View
Populus trichocarpa Potri.004G121800 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED Chr04 - View
Phaseolus vulgaris Phvul.008G037000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr08 + View
Phaseolus vulgaris Phvul.002G170600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr02 + View
Quercus lobata QL10p017159 10 + View
Quercus lobata QL02p082478 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr7g0181561 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim10G0038600 chr10 + View
Rhododendron simsii Rhsim08G0069900 chr08 - View
Striga asiatica SGA_v2.0_scaffold413G51191 scaffold413 - View
Salvia bowleyana SalBow2G2111 GWHASIU00000007 - View
Salix brachista Sabra17G0074500 GWHAAZH00000017 + View
Salix brachista Sabra04G0091000 GWHAAZH00000004 + View
Sechium edule Sed0005974 LG06 - View
Sechium edule Sed0019073 LG08 - View
Sechium edule Sed0011956 LG06 + View
Sechium edule Sed0027222 LG08 + View
Solanum lycopersicum Solyc02g088070.3 Dof zinc finger protein (AHRD V3.3 *** A0A2K3PAB0_TRIPR) SL4.0ch02 + View
Schrenkiella parvula Sp1g22010 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED ch1-1 + View
Solanum pennellii Sopen02g032780 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 2 (CDF2) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400025129 Zinc finger protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400001330 Zinc finger protein ST4.03ch02 - View
Trochodendron aralioides TAR371G0107 group13 + View
Theobroma cacao Thecc.04G083700 Dof zinc finger protein DOF5.2 Chromosome_4 + View
Theobroma cacao Thecc.02G344400 F-box family protein Chromosome_2 - View
Vaccinium macrocarpon vmacro18190 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G1030 CM024077.1 - View
Vigna mungo VMungo1383G0234 CM024070.1 - View
Vigna mungo VMungo1215G3254 CM024074.1 + View