Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0046674 PREDICTED: zinc finger CCCH domain-containing protein 41 [Vitis vinifera] Chr1 + View
CSS0034547 PREDICTED: zinc finger CCCH domain-containing protein 41 [Vitis vinifera] Contig655 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G4970 LG-2 - View
Acer truncatum Atru.chr6.2272 chr6 + View
Acer truncatum Atru.chr6.2364 chr6 + View
Actinidia chinensis Actinidia35766 Lachesis_group21 - View
Arabidopsis lyrata AL5G17140 scaffold_5 - View
Avicennia marina MSTRG.24033 ScioBoG_3895_HRSCAF_3912 + View
Avicennia marina MSTRG.3149 ScioBoG_102835_HRSCAF_103059 - View
Aquilegia oxysepala Aqoxy3G01151 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MY3LMM K13192 - RNA-binding protein 26 (RBM26) arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B Has 3784 Blast hits to 2558 proteins in 341 species: Archae - 8%3B Bacteria - 515%3B Metazoa - 625%3B Fungi - 291%3B Plants - 164%3B Viruses - 7%3B Other Eukaryotes - 2174 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC03g17479 ChrC03 - View
Brassica carinata BcaC06g30963 ChrC06 + View
Brassica napus A09p03500 A09 - View
Brassica napus A02p35600 A02 - View
Brassica napus C02p54430 C02 - View
Brassica napus A06p40940 A06 + View
Brassica napus C07p36880 C07 - View
Brassica oleracea BolC7t44200H C7 - View
Brassica oleracea BolC2t11504H C2 - View
Brassica rapa BraA02t08562Z A02 - View
Brassica rapa BraA06t27015Z A06 + View
Cannabis sativa CANSAT64G1680 NC_044379.1 - View
Cicer arietinum L. Ca_04156_v3 Ca_LG2_v3 - View
Coffea canephora Cc07_g01820 Putative Zinc finger CCCH domain-containing protein 41 chr7 - View
Citrus clementina Ciclev10014173m.g scaffold_2 + View
Cardamine hirsuta CARHR149170 Zinc finger CCCH domain-containing protein 41 Chr5 - View
Carya illinoinensis CiPaw.03G042300 K13192 - RNA-binding protein 26 (RBM26) Chr03 + View
Carya illinoinensis CiPaw.04G027900 PTHR14398//PTHR14398:SF0 - RNA RECOGNITION RRM/RNP DOMAIN // SECOND MITOTIC WAVE MISSING, ISOFORM C Chr04 + View
Citrullus lanatus ClCG10G013970 RNA-binding protein 26 CG_Chr10 - View
Cucumis melo MELO3C009984.2 Zinc finger CCCH domain-containing protein 41 chr04 - View
Carica papaya Cpa.g.sc108.55 supercontig_108 + View
Capsella rubella Carub.0005s0625 K13192 - RNA-binding protein 26 (RBM26) scaffold_5 - View
Cucumis sativus L. CsaV3_3G042720 Zinc finger ccch domain-containing protein 41 chr3 + View
Daucus carota DCAR_011248 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv35101 GWHABJS00000012 + View
Davidia involucrata Dinv33450 GWHABJS00000014 - View
Durio zibethinus Duzib187G1135 NW_019167860.1 - View
Durio zibethinus Duzib264G1220 NW_019167960.1 - View
Erigeron canadensis ECA238G4588 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.I01752 Chr09 + View
Erythranthe guttata Migut.H00084 scaffold_8 - View
Eutrema salsugineum Thhalv10003632m.g K13192 - RNA-binding protein 26 (RBM26) scaffold_6 + View
Fragaria x ananassa FAN09G1146 K13192 - RNA-binding protein 26 (RBM26) Fvb6-2 - View
Fragaria x ananassa FAN14G5704 K13192 - RNA-binding protein 26 (RBM26) Fvb6-1 - View
Fragaria x ananassa FAN05G2840 K13192 - RNA-binding protein 26 (RBM26) Fvb6-3 - View
Fragaria vesca FvH4_6g51350 K13192 - RNA-binding protein 26 (RBM26) Fvb6 + View
Gossypium hirsutum Gohir.A05G356200 K13192 - RNA-binding protein 26 (RBM26) A05 - View
Gossypium hirsutum Gohir.D07G229300 PTHR14398:SF0 - SECOND MITOTIC WAVE MISSING, ISOFORM C D07 + View
Gossypium hirsutum Gohir.D09G028200 PTHR14398:SF0 - SECOND MITOTIC WAVE MISSING, ISOFORM C D09 - View
Gossypium hirsutum Gohir.A11G066633 PTHR14398:SF0 - SECOND MITOTIC WAVE MISSING, ISOFORM C A11 - View
Gossypium hirsutum Gohir.A09G028600 PTHR14398:SF0 - SECOND MITOTIC WAVE MISSING, ISOFORM C A09 - View
Gossypium hirsutum Gohir.D04G057000 K13192 - RNA-binding protein 26 (RBM26) D04 + View
Gossypium hirsutum Gohir.A07G222600 PTHR14398:SF0 - SECOND MITOTIC WAVE MISSING, ISOFORM C A07 + View
Gossypium hirsutum Gohir.D11G070750 PTHR14398:SF0 - SECOND MITOTIC WAVE MISSING, ISOFORM C D11 - View
Glycine max Glyma.19G004000 K13192 - RNA-binding protein 26 (RBM26) Gm19 - View
Glycine max Glyma.05G004100 K13192 - RNA-binding protein 26 (RBM26) Gm05 + View
Gossypium raimondii Gorai.007G075900 Chr07 - View
Gossypium raimondii Gorai.006G032800 Chr06 - View
Gossypium raimondii Gorai.001G264400 Chr01 + View
Gossypium raimondii Gorai.012G063700 Chr12 + View
Helianthus annuus HanXRQChr07g0198951 Probable zinc finger CCCH domain-containing protein 27 HanXRQChr07 - View
Lupinus albus Lalb_Chr06g0175811 K13192 - RNA-binding protein 26 (RBM26) Lalb_Chr06 - View
Lotus japonicus Lj2g0025004 K13192 - RNA-binding protein 26 (RBM26) chr2 - View
Lactuca sativa Lsat_1_v5_gn_4_183501 Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_2_91520 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI10_g00730_MAGBIO AED:0.14 Chr10 + View
Malus domestica MD09G1028400 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein Chr09 - View
Malus domestica MD17G1029900 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein Chr17 - View
Manihot esculenta Manes.17G115600 Chromosome17 + View
Medicago truncatula Medtr6g004970 zinc finger CCCH domain protein chr6 + View
Nelumbo nucifera Nn4g22660 chr4 - View
Nelumbo nucifera Nn3g16761 chr3 - View
Nicotiana tabacum Nitab4.5_0002682g0090 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait, Zinc finger, CCCH-type Nitab4.5_0002682 + View
Petunia axillaris Peaxi162Scf00129g01426 Zinc finger CCCH domain-containing protein 41 Peaxi162Scf00129 + View
Petunia axillaris Peaxi162Scf00700g00429 Zinc finger CCCH domain-containing protein 41 Peaxi162Scf00700 - View
Punica granatum PGR083G1229 NC_045133.1 - View
Punica granatum PGR142G1836 NC_045128.1 - View
Prunus persica Prupe.3G289600 K13192 - RNA-binding protein 26 (RBM26) Pp03 + View
Phaseolus vulgaris Phvul.004G007600 K13192 - RNA-binding protein 26 (RBM26) Chr04 + View
Quercus lobata QL02p075116 CM012294 - View
Rhododendron simsii Rhsim08G0051400 chr08 - View
Striga asiatica SGA_v2.0_scaffold135G34898 scaffold135 + View
Striga asiatica SGA_v2.0_scaffold481G52311 scaffold481 - View
Simmondsia chinensis Sc03g0007560 GWHAASQ00000003 - View
Sechium edule Sed0015855 LG08 + View
Sechium edule Sed0000390 LG06 - View
Solanum lycopersicum Solyc02g086510.4 Zinc finger transcription factor 22 SL4.0ch02 - View
Schrenkiella parvula Sp2g16820 K13192 - RNA-binding protein 26 (RBM26) ch2-4 - View
Solanum pennellii Sopen02g031230 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400012599 Rrm/rnp domain ST4.03ch02 + View
Trochodendron aralioides TAR622G0533 group8 + View
Trochodendron aralioides TAR629G1826 group0 - View
Theobroma cacao Thecc.04G015700 Zinc finger family protein / RNA recognition motif-containing protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104805377 zinc finger CCCH domain-containing protein 41 NW_010961290.1 - View
Tripterygium wilfordii TWI56G0063 NC_052242.1 + View
Utricularia gibba unitig_0.g1601 unitig_0 - View
Vaccinium macrocarpon vmacro18276 Similar to At3g27700: Zinc finger CCCH domain-containing protein 41 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G0503 CM024077.1 + View
Vitis vinifera GSVIVG01032423001 chr14 - View