Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0050429 PREDICTED: 18 kDa seed maturation protein-like [Nicotiana tomentosiformis] Chr14 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G13400 LG-2 - View
Acer truncatum Atru.chr6.1738 chr6 - View
Actinidia chinensis Actinidia09218 Lachesis_group13 - View
Actinidia chinensis Actinidia14815 Lachesis_group14 - View
Arabidopsis lyrata AL1G46810 scaffold_1 + View
Amaranthus hybridus Ah.07g200240 Late embryogenesis abundant protein 6 (Late embryogenesis abundant protein 4-1) (AtLEA4-1) AmaHy_arrow1_Scaffold_7 + View
Arabidopsis thaliana AT1G32560 Late embryogenesis abundant protein, group 1 protein Encodes LEA4-1%2C a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Late embryogenesis abundant protein%2C group 1 protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: embryo development%2C embryo development ending in seed dormancy%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: stem%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 1 (InterPro:IPR005513)%3B BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein%2C group 1 protein (TAIR:AT2G35300.1)%3B Has 218 Blast hits to 218 proteins in 47 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 47%3B Fungi - 0%3B Plants - 166%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0049G014 AmTr_v1.0_scaffold00149 + View
Brassica carinata BcaB07g32955 ChrB07 + View
Brassica carinata BcaC05g27297 ChrC05 + View
Brassica napus C05p32030 C05 + View
Brassica napus A09p33650 A09 - View
Brassica oleracea BolC5t31929H C5 + View
Brassica rapa BraA08t32903Z A08 + View
Capsicum annuum CAN.G201.20 PGAv.1.6.scaffold201 + View
Cannabis sativa CANSAT21G2393 NC_044374.1 + View
Cicer arietinum L. Ca_22071_v3 Ca_LG7_v3 + View
Corylus avellana Haze_08257 Similar to LEA6: Late embryogenesis abundant protein 6 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g02520 Putative Late embryogenesis abundant protein, group 1 protein chr8 + View
Citrus clementina Ciclev10033018m.g scaffold_4 - View
Ceratophyllum demersum CDE12G0317 10 + View
Carpinus fangiana Cfa012419 Cfa05 + View
Cardamine hirsuta CARHR032010 Seed maturation protein Chr1 + View
Carya illinoinensis CiPaw.11G092000 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Chr11 + View
Citrullus lanatus ClCG10G001740 Seed maturation protein CG_Chr10 - View
Cucumis melo MELO3C032260.2 Seed maturation protein chr06 - View
Corchorus olitorius COL.COLO4_17062 Late embryogenesis abundant protein AWUE01016285.1 - View
Cucumis sativus L. CsaV3_3G001850 Seed maturation protein chr3 - View
Daucus carota DCAR_008279 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_005623 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv28942 GWHABJS00000003 + View
Davidia involucrata Dinv25203 GWHABJS00000017 + View
Erigeron canadensis ECA240G0465 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.E00290 Chr05 - View
Eutrema salsugineum Thhalv10009848m.g PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED scaffold_5 - View
Fragaria x ananassa FAN08G0008 PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED Fvb5-3 - View
Fragaria x ananassa FAN18G2652 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Fvb5-1 + View
Fragaria x ananassa FAN04G2965 PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED Fvb5-4 + View
Fragaria x ananassa FAN13G0501 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Fvb5-2 + View
Fragaria vesca FvH4_5g21830 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Fvb5 + View
Gossypium hirsutum Gohir.D08G178000 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED D08 - View
Gossypium hirsutum Gohir.A08G157700 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED A08 - View
Glycine max Glyma.17G155000 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Gm17 + View
Glycine max Glyma.05G112000 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Gm05 - View
Gossypium raimondii Gorai.004G186200 Chr04 - View
Helianthus annuus HanXRQChr03g0084061 Probable late embryogenesis abundant protein, group 1 protein HanXRQChr03 - View
Hydrangea macrophylla Hma1.2p1_0585F.1_g183650 Hma1.2p1_0585F.1 + View
Lupinus albus Lalb_Chr16g0386011 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Lalb_Chr16 - View
Lotus japonicus Lj4g0022663 PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED chr4 + View
Lonicera japonica Lj2A242T77 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_6_78560 PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED Lsat_1_v8_lg_6 + View
Magnolia biondii MBI04_g22943_MAGBIO AED:0.01 Chr04 + View
Malus domestica MD06G1032700 Late embryogenesis abundant protein Chr06 + View
Manihot esculenta Manes.15G168800 Chromosome15 - View
Medicago truncatula Medtr4g098480 late embryogenesis abundant protein chr4 - View
Nelumbo nucifera Nn1g00546 chr1 - View
Nelumbo nucifera Nn6g33613 chr6 - View
Petunia axillaris Peaxi162Scf00460g00044 Unknown protein Peaxi162Scf00460 + View
Punica granatum PGR042G1904 NC_045130.1 - View
Prunus persica Prupe.5G039300 Pp05 - View
Pisum sativum Psat4g078840 Late embryogenesis abundant (LEA) group 1 chr4LG4 - View
Populus trichocarpa Potri.003G090501 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Chr03 + View
Populus trichocarpa Potri.001G143700 PTHR33493//PTHR33493:SF6 - FAMILY NOT NAMED // LEA D113 HOMOLOGUE TYPE2-RELATED Chr01 - View
Phaseolus vulgaris Phvul.003G230300 PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED Chr03 + View
Rhododendron simsii Rhsim07G0125700 chr07 + View
Sechium edule Sed0010879 LG04 + View
Solanum lycopersicum Solyc06g061110.2 late embryogenesis abundant protein 6 (AHRD V3.3 *** XP_004241969.1) SL4.0ch06 + View
Schrenkiella parvula Sp1g28340 PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED ch1-1 - View
Solanum pennellii Sopen06g021310 hypothetical protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400002093 Seed maturation protein ST4.03ch06 + View
Selenicereus undatus Hund11251 Scaffold_10417 - View
Theobroma cacao Thecc.03G229800 Late embryogenesis abundant protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104807957 18 kDa seed maturation protein NW_010963717.1 - View
Tripterygium wilfordii TWI81G0167 NC_052251.1 + View
Vitis vinifera GSVIVG01013196001 chr2 - View