Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047486 PREDICTED: protein SMG7-like isoform X1 [Solanum tuberosum] Chr13 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia38162 Lachesis_group3 + View
Actinidia chinensis Actinidia01818 Lachesis_group5 - View
Actinidia chinensis Actinidia17692 Lachesis_group21 + View
Amaranthus hybridus Ah.04g150960 Protein SMG7 (SMG7 homolog) AmaHy_arrow1_Scaffold_4 - View
Aquilegia oxysepala Aqoxy2G00385 CHR02 - View
Beta vulgaris EL10Ac3g07233 K14409 - protein SMG7 (SMG7, EST1C) Chr3_EL10_PGA_scaffold7 + View
Capsicum annuum CAN.G128.68 PGAv.1.6.scaffold128 + View
Coffea canephora Cc06_g19160 Telomerase activating protein Est1 chr6 + View
Carya illinoinensis CiPaw.09G047400 K14409 - protein SMG7 (SMG7, EST1C) Chr09 + View
Chenopodium quinoa AUR62018344 SMG7: Protein SMG7 C_Quinoa_Scaffold_4077 + View
Chenopodium quinoa AUR62030323 SMG7: Protein SMG7 C_Quinoa_Scaffold_3970 - View
Davidia involucrata Dinv09713 GWHABJS00000015 + View
Davidia involucrata Dinv12046 GWHABJS00000021 - View
Erigeron canadensis ECA248G1036 Conyza_canadensis_scaffold:9 - View
Erythranthe guttata Migut.K00132 scaffold_11 + View
Lonicera japonica Lj1C1093G8 GWHAAZE00000001 + View
Papaver somniferum PSO339G4474 NC_039366.1 + View
Papaver somniferum PSO384G2306 NC_039368.1 + View
Populus trichocarpa Potri.006G038500 K14409 - protein SMG7 (SMG7, EST1C) Chr06 + View
Quercus lobata QL07p010324 7 + View
Salvia bowleyana SalBow6G4459 GWHASIU00000002 - View
Salix brachista Sabra06G0025900 GWHAAZH00000006 + View
Solanum lycopersicum Solyc10g080740.2 Protein SMG7 (AHRD V3.3 *** A0A1U8E8Y3_CAPAN) SL4.0ch10 + View
Solanum pennellii Sopen10g031280 Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality. | SMG7 | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 | BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 . Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400023698 Cig3 ST4.03ch10 - View
Selenicereus undatus Hund19098 Scaffold_33673 - View
Trochodendron aralioides TAR623G1343 group7 - View
Trochodendron aralioides TAR633G2268 group2 + View
Tripterygium wilfordii TWI74G0935 NC_052234.1 + View
Tripterygium wilfordii TWI77G0714 NC_052236.1 - View
Vitis vinifera GSVIVG01033622001 chr8 - View