Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049783 PREDICTED: autophagy-related protein 8C [Sesamum indicum] Chr7 - View
CSS0012169 PREDICTED: autophagy-related protein 8C isoform X2 [Elaeis guineensis] Chr8 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr10.2235 chr10 + View
Acer truncatum Atru.chr6.3191 chr6 + View
Actinidia chinensis Actinidia05511 Lachesis_group20 - View
Actinidia chinensis Actinidia11854 Lachesis_group6 + View
Actinidia chinensis Actinidia26910 Lachesis_group0 - View
Arabidopsis lyrata AL7G31720 scaffold_7 - View
Arabidopsis lyrata AL2G13870 scaffold_2 - View
Avicennia marina MSTRG.15991 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.7206 ScioBoG_102840_HRSCAF_103099 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EXRI64 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8SMT51 PF02991//PF04110 - Autophagy protein Atg8 ubiquitin like (Atg8) // Ubiquitin-like autophagy protein Apg12 (APG12) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IDQ1YW K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CQM6UK K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.14 + View
Arabidopsis thaliana AT4G21980 Ubiquitin-like superfamily protein Encodes APG8%2C a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Highest expression in flowers. mRNA abundance increased during dark-induced carbon starvation. Predominantly cytoplasmic with or without N starvation. Upon concanamycin A the protein accumulates in the central vacuole as punctuate structures that resemble autophagic bodies. This localization is more abundant upon N starvation. AUTOPHAGY 8A (APG8A)%3B CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G04620.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT1G62040 Ubiquitin-like superfamily protein autophagy 8c (ATG8C)%3B CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT2G05630.1)%3B Has 1515 Blast hits to 1513 proteins in 273 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 720%3B Fungi - 178%3B Plants - 302%3B Viruses - 3%3B Other Eukaryotes - 312 (source: NCBI BLink). autophagy 8c (ATG8C)%3B FUNCTIONS IN: microtubule binding%3B INVOLVED IN: autophagy%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). Chr1 + View
Brassica carinata BcaNung00821 Contig365 - View
Brassica carinata BcaC06g31877 ChrC06 + View
Brassica carinata BcaC09g51174 ChrC09 - View
Brassica carinata BcaC02g10514 ChrC02 - View
Brassica napus A03p53170 A03 + View
Brassica napus C07p51540 C07 + View
Brassica napus A01p13360 A01 + View
Brassica oleracea BolC7t45652H C7 + View
Brassica oleracea BolC1t01568H C1 + View
Brassica rapa BraA03t14385Z A03 + View
Brassica rapa BraA01t01279Z A01 + View
Beta vulgaris EL10Ac8g20066 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr8_EL10_PGA_scaffold4 + View
Capsicum annuum CAN.G569.4 PGAv.1.6.scaffold569 - View
Corylus avellana Haze_06806 Similar to ATG8CL: Autophagy-related protein 8C-like (Solanum tuberosum OX%3D4113) 2 + View
Coffea canephora Cc09_g01620 Autophagy-related protein 8C chr9 - View
Citrus clementina Ciclev10017176m.g scaffold_2 + View
Carpinus fangiana Cfa014393 Cfa06 - View
Cardamine hirsuta CARHR228790 Autophagy-related protein 8a Chr7 + View
Cardamine hirsuta CARHR050150 Autophagy-related protein 8c Chr2 - View
Cardamine hirsuta CARHR252910 Autophagy-related protein 8a Chr8 + View
Carya illinoinensis CiPaw.10G071600 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr10 + View
Citrullus lanatus ClCG01G021950 Autophagy-related protein CG_Chr01 - View
Citrullus lanatus ClCG03G004680 Autophagy-related protein CG_Chr03 - View
Cucumis melo MELO3C007393.2 Autophagy-related protein chr08 + View
Cucumis melo MELO3C002452.2 Autophagy-related protein chr12 + View
Carica papaya Cpa.g.sc152.20 supercontig_152 + View
Chenopodium quinoa AUR62021940 ATG8C: Autophagy-related protein 8C C_Quinoa_Scaffold_1862 - View
Chenopodium quinoa AUR62012715 ATG8B: Autophagy-related protein 8B C_Quinoa_Scaffold_2715 + View
Capsella rubella Carub.0007s1936 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED scaffold_7 - View
Capsella rubella Carub.0002s0298 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED scaffold_2 - View
Cucumis sativus L. CsaV3_6G049010 Autophagy-related protein chr6 - View
Davidia involucrata Dinv40765 GWHABJS00000013 - View
Davidia involucrata Dinv20057 GWHABJS00000020 + View
Davidia involucrata Dinv13898 GWHABJS00000016 + View
Davidia involucrata Dinv05427 GWHABJS00000013 - View
Durio zibethinus Duzib235G1302 NW_019167982.1 + View
Durio zibethinus Duzib192G0656 NW_019168037.1 - View
Erigeron canadensis ECA236G4995 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.D01326 Chr04 + View
Eucalyptus grandis Eucgr.E04051 Chr05 + View
Eutrema salsugineum Thhalv10026531m.g scaffold_1 - View
Eutrema salsugineum Thhalv10023763m.g K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) scaffold_8 - View
Fragaria x ananassa FAN25G2162 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Fvb3-1 + View
Fragaria x ananassa FAN21G2095 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Fvb3-2 + View
Fragaria vesca FvH4_3g01980 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED Fvb3 - View
Gossypium hirsutum Gohir.D05G173800 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED D05 + View
Gossypium hirsutum Gohir.A05G170800 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED A05 + View
Gossypium hirsutum Gohir.A10G012500 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED A10 - View
Gossypium hirsutum Gohir.D10G012000 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED D10 - View
Glycine max Glyma.17G013000 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Gm17 - View
Glycine max Glyma.15G108200 PF02991//PF04110 - Autophagy protein Atg8 ubiquitin like (Atg8) // Ubiquitin-like autophagy protein Apg12 (APG12) Gm15 + View
Glycine max Glyma.09G003900 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Gm09 + View
Glycine max Glyma.07G261000 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Gm07 + View
Gossypium raimondii Gorai.009G179100 Chr09 + View
Gossypium raimondii Gorai.011G013500 Chr11 - View
Helianthus annuus HanXRQChr05g0129481 Putative autophagy protein Atg8 ubiquitin-like; Ubiquitin-related domain HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0091F.1_g046440 Hma1.2p1_0091F.1 + View
Lupinus albus Lalb_Chr15g0087641 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Lalb_Chr15 + View
Lupinus albus Lalb_Chr18g0056401 PF02991 - Autophagy protein Atg8 ubiquitin like (Atg8) Lalb_Chr18 + View
Lotus japonicus Lj6g0002314 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED chr6 + View
Lactuca sativa Lsat_1_v5_gn_7_16200 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Lsat_1_v8_lg_7 - View
Malus domestica MD05G1345400 Ubiquitin-like superfamily protein Chr05 + View
Manihot esculenta Manes.15G070700 Chromosome15 - View
Manihot esculenta Manes.17G026600 Chromosome17 - View
Manihot esculenta Manes.16G006500 Chromosome16 - View
Medicago truncatula Medtr2g023430 gaba-receptor-associated protein ubiquitin domain protein chr2 + View
Oryza sativa ssp. japonica Os07g0512200 Core component of an autophagy gene, Nitrogen use efficiency and yield chr07 - View
Punica granatum PGR004G0850 NC_045131.1 + View
Prunus persica Prupe.3G216800 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Pp03 - View
Prunus persica Prupe.4G019800 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Pp04 - View
Papaver somniferum PSO832G2968 NC_039367.1 + View
Populus trichocarpa Potri.004G013700 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr04 - View
Populus trichocarpa Potri.011G004300 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr11 + View
Phaseolus vulgaris Phvul.003G079300 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr03 + View
Phaseolus vulgaris Phvul.006G149640 Chr06 - View
Quercus lobata QL05p073035 5 - View
Quercus lobata QL08p033000 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0002891 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim02G0106700 chr02 - View
Rhododendron simsii Rhsim13G0153400 chr13 - View
Striga asiatica SGA_v2.0_scaffold4G01910 scaffold4 - View
Striga asiatica SGA_v2.0_scaffold7G03832 scaffold7 - View
Salvia bowleyana SalBow8G3254 GWHASIU00000004 - View
Salix brachista Sabra04G0006500 GWHAAZH00000004 - View
Salix brachista Sabra11G0003400 GWHAAZH00000011 + View
Simmondsia chinensis Sc17g0007410 GWHAASQ00000017 + View
Sechium edule Sed0009992 LG14 - View
Schrenkiella parvula Sp7g20170 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED ch7-4 + View
Solanum pennellii Sopen02g025290 autophagy 8c (ATG8C) | FUNCTIONS IN: microtubule binding | INVOLVED IN: autophagy | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) | BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein ., Autophagy protein Atg8 ubiquitin-like Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400005075 Gaba(A) receptor-associated protein ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400016479 Gaba(A) receptor-associated protein ST4.03ch02 + View
Selenicereus undatus Hund21412 Scaffold_33680 - View
Trochodendron aralioides TAR626G0371 group3 + View
Trochodendron aralioides TAR624G1102 group9 - View
Theobroma cacao Thecc.06G221600 Ubiquitin-like superfamily protein Chromosome_6 + View
Tarenaya hassleriana THA.LOC104813143 autophagy-related protein 8a isoform X1 NW_010960187.1 + View
Tripterygium wilfordii TWI38G1799 NC_052252.1 + View
Tripterygium wilfordii TWI63G0504 NC_052240.1 - View
Vaccinium macrocarpon vmacro15808 Similar to ATG8CL: Autophagy-related protein 8C-like (Solanum tuberosum OX%3D4113) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G2285 CM024075.1 + View
Vigna mungo VMungo1215G1635 CM024074.1 - View
Vitis vinifera GSVIVG01012719001 chr10 - View