Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0013813 PREDICTED: root phototropism protein 3-like isoform X1 [Citrus sinensis] Contig509 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G17570 LG-1 - View
Acer truncatum Atru.chr6.1227 chr6 + View
Actinidia chinensis Actinidia24013 Lachesis_group2 + View
Actinidia chinensis Actinidia00293 Lachesis_group12 - View
Arabidopsis lyrata AL8G41690 scaffold_8 + View
Avicennia marina MSTRG.16608 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.27811 ScioBoG_94932_HRSCAF_95134 + View
Amaranthus hybridus Ah.01g007500 Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3) AmaHy_arrow1_Scaffold_1 - View
Amaranthus hybridus Ah.01g024040 AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy6G01465 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZKJP05 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H8DYH4 PF03000 - NPH3 family (NPH3) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5Y2C3U PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4T09L2 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IPHF02 PTHR32370//PTHR32370:SF37 - FAMILY NOT NAMED // BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GKWH5W PTHR32370//PTHR32370:SF37 - FAMILY NOT NAMED // BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PKZ6FU PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT5G64330 Phototropic-responsive NPH3 family protein Involved in blue light response signaling pathway%3B interacts with the blue light photoreceptor NPH1. Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains. NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3)%3B CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249)%2C BTB/POZ fold (InterPro:IPR011333)%2C BTB/POZ-like (InterPro:IPR000210)%3B BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica napus A06p31000 A06 + View
Brassica napus C03p61960 C03 - View
Brassica oleracea BolC3t18455H C3 - View
Brassica rapa BraA06t26042Z A06 + View
Capsicum annuum CAN.G523.30 PGAv.1.6.scaffold523 - View
Cicer arietinum L. Ca_00155_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_18371_v3 Ca_LG6_v3 + View
Corylus avellana Haze_10555 Similar to RPT3: Root phototropism protein 3 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc02_g21030 Root phototropism protein 3 chr2 - View
Carpinus fangiana Cfa005694 Cfa02 + View
Cardamine hirsuta CARHR278260 Phototropic-responsive NPH3 family protein Chr8 + View
Carya illinoinensis CiPaw.05G031300 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Chr05 - View
Carya illinoinensis CiPaw.06G156700 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 Chr06 + View
Citrullus lanatus ClCG09G015920 Phototropic-responsive NPH3 family protein LENGTH=746 CG_Chr09 - View
Citrullus lanatus ClCG10G009530 Phototropic-responsive NPH3 family protein LENGTH=746 CG_Chr10 + View
Chenopodium quinoa AUR62027122 RPT3: Root phototropism protein 3 C_Quinoa_Scaffold_2314 - View
Chenopodium quinoa AUR62012898 RPT3: Root phototropism protein 3 C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0008s2512 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 scaffold_8 + View
Cucumis sativus L. CsaV3_4G009650 root phototropism protein 3 chr4 + View
Daucus carota DCAR_029190 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_021887 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv24161 GWHABJS00000005 - View
Davidia involucrata Dinv15986 GWHABJS00000002 + View
Durio zibethinus Duzib248G0007 NW_019168048.1 + View
Durio zibethinus Duzib132G1054 NW_019167915.1 - View
Erigeron canadensis ECA236G2139 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA234G1085 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.G00960 Chr07 + View
Erythranthe guttata Migut.B00566 scaffold_2 - View
Erythranthe guttata Migut.N01090 scaffold_14 + View
Eutrema salsugineum Thhalv10003710m.g PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 scaffold_6 - View
Gossypium hirsutum Gohir.A03G175800 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 A03 + View
Gossypium hirsutum Gohir.D13G051200 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 D13 + View
Gossypium hirsutum Gohir.D03G037300 PTHR32370//PTHR32370:SF37 - FAMILY NOT NAMED // BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED D03 - View
Gossypium hirsutum Gohir.A02G143200 PTHR32370//PTHR32370:SF37 - FAMILY NOT NAMED // BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED A02 + View
Gossypium hirsutum Gohir.A13G070500 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 A13 - View
Glycine max Glyma.01G025300 PF03000 - NPH3 family (NPH3) Gm01 + View
Glycine max Glyma.08G069800 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Gm08 - View
Glycine max Glyma.07G180900 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Gm07 + View
Glycine max Glyma.15G056500 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Gm15 + View
Glycine max Glyma.13G258700 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Gm13 - View
Gossypium raimondii Gorai.003G039100 Chr03 - View
Lupinus albus Lalb_Chr15g0090351 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Lalb_Chr15 - View
Lupinus albus Lalb_Chr18g0060461 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Lalb_Chr18 - View
Lotus japonicus Lj6g0005625 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 chr6 - View
Lotus japonicus Lj4g0014549 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 chr4 - View
Lonicera japonica Lj5A232T95 GWHAAZE00000005 - View
Lonicera japonica Lj9A348T68 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_7_83740 Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_5_109081 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI06_g42715_MAGBIO AED:0.07 Chr06 + View
Malus domestica MD05G1047100 Phototropic-responsive NPH3 family protein Chr05 + View
Malus domestica MD10G1053800 Phototropic-responsive NPH3 family protein Chr10 + View
Manihot esculenta Manes.07G037100 Chromosome07 + View
Medicago truncatula Medtr2g009340 phototropic-responsive NPH3 family protein chr2 + View
Medicago truncatula Medtr4g093850 phototropic-responsive NPH3 family protein chr4 - View
Petunia axillaris Peaxi162Scf00299g00849 Phototropic-responsive NPH3 family protein Peaxi162Scf00299 - View
Punica granatum PGR042G2747 NC_045130.1 + View
Prunus persica Prupe.8G067500 Pp08 + View
Pisum sativum Psat1g214600 NPH3 family chr1LG6 - View
Pisum sativum Psat7g100600 NPH3 family chr7LG7 + View
Populus trichocarpa Potri.007G112600 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Chr07 + View
Populus trichocarpa Potri.017G048200 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Chr17 - View
Phaseolus vulgaris Phvul.006G203600 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Chr06 - View
Phaseolus vulgaris Phvul.002G211400 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Chr02 - View
Phaseolus vulgaris Phvul.002G149400 PF03000 - NPH3 family (NPH3) Chr02 + View
Quercus lobata QL11p023808 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0271301 RcHm_v2.0_Chr6 + View
Striga asiatica SGA_v2.0_scaffold83G26349 scaffold83 + View
Salvia bowleyana SalBow8G5561 GWHASIU00000004 + View
Salix brachista Sabra17G0032700 GWHAAZH00000017 - View
Salix brachista Sabra07G0092000 GWHAAZH00000007 + View
Sechium edule Sed0026147 LG10 + View
Sechium edule Sed0011914 LG13 + View
Sechium edule Sed0016365 LG07 - View
Solanum lycopersicum Solyc01g105680.4 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1PJR6_ARTAN) SL4.0ch01 + View
Solanum lycopersicum Solyc02g064720.3 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2XBD2_CAPBA) SL4.0ch02 - View
Solanum lycopersicum Solyc10g047530.2 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1PJR6_ARTAN) SL4.0ch10 + View
Schrenkiella parvula Sp2g27390 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 ch2-4 + View
Solanum pennellii Sopen01g048130 Involved in blue light response signaling pathway | interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains. | NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3) | CONTAINS InterPro DOMAIN/s: NPH3 , BTB/POZ fold , BTB/POZ-like | BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400002400 NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3) ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400033569 NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3) ST4.03ch01 + View
Trochodendron aralioides TAR628G1646 group5 + View
Theobroma cacao Thecc.02G132200 Phototropic-responsive NPH3 family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104799835 root phototropism protein 3 NW_010960188.1 - View
Trifolium pratense TPR.G9484 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI59G0183 NC_052248.1 + View
Tripterygium wilfordii TWI23G0226 NC_052239.1 + View
Vaccinium macrocarpon vmacro01850 Similar to RPT3: Root phototropism protein 3 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G1806 CM024069.1 - View
Vigna mungo VMungo0540G2352 CM024075.1 + View
Vitis vinifera GSVIVG01012508001 chr3_random + View