Gene: AT5G64330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G64330
  • Transcript Identifier AT5G64330.1
  • Gene Type Coding gene
  • Location Chr5 : 25727568-25730225 : positive

Gene Family Information

  • ID HOM05D000091
  • #Genes/#Species 3486/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G64330.1
  • symbol NPH3
  • Alias JK218,RPT3,ROOT PHOTOTROPISM 3
  • full_name NON-PHOTOTROPIC HYPOCOTYL 3
  • uniprot Q9FMF5

Descriptions

  • Description Phototropic-responsive NPH3 family protein
  • Computational description NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IMP
IEA
Gene Ontologyprotein ubiquitination1
GO:0016567
IEA
InterProprotein ubiquitination
GO:0009785
IPI, IGI
Gene Ontologyblue light signaling pathway2 3
GO:0009638
IMP
Gene Ontologyphototropism2
GO:0007165
IEA
GOA Databasesignal transduction

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA
ISM
NAS
Gene Ontologyplasma membrane4
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043454 NPH3/RPT2-like family
IPR029959 Root phototropism protein 3-like
IPR027356 NPH3 domain
IPR011333 SKP1/BTB/POZ domain superfamily
Mapman id Description
35.1 not assigned.annotated