Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005844 PREDICTED: probable calcium-binding protein CML20 [Pyrus x bretschneideri] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G13960 LG-6 - View
Acer truncatum Atru.chr3.338 chr3 + View
Arabidopsis lyrata AL5G30490 scaffold_5 + View
Arabidopsis lyrata AL7G13780 scaffold_7 + View
Aquilegia oxysepala Aqoxy5G01235 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6JR7QB KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT4G37010 centrin 2 Encodes a member of the Centrin family. Mutants are hypersensitive to UV and prone to UV induced DNA damage. Based on sequence similarity and mutant phenotype CEN2 is thought to be involved in nucelotide excision repair/DNA repair. centrin 2 (CEN2)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: DNA repair%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: centrin2 (TAIR:AT3G50360.1)%3B Has 28959 Blast hits to 19034 proteins in 1566 species: Archae - 1%3B Bacteria - 97%3B Metazoa - 12402%3B Fungi - 5615%3B Plants - 6440%3B Viruses - 0%3B Other Eukaryotes - 4404 (source: NCBI BLink). centrin 2 (CEN2)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: DNA repair%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: centrin2 (TAIR:AT3G50360.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT3G50360 centrin2 centrin2 (CEN2)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2)%3B Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1%3B Bacteria - 190%3B Metazoa - 13563%3B Fungi - 7187%3B Plants - 7027%3B Viruses - 2%3B Other Eukaryotes - 4855 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB05g23213 ChrB05 + View
Brassica carinata BcaNung02517 Contig886 - View
Brassica carinata BcaB01g00622 ChrB01 - View
Capsicum annuum CAN.G660.4 PGAv.1.6.scaffold660 - View
Cannabis sativa CANSAT01G0976 NC_044373.1 - View
Cicer arietinum L. Ca_24773_v3 Ca_LG8_v3 + View
Corylus avellana Haze_15406 Similar to Caltractin (Atriplex nummularia OX%3D3553) 11 + View
Citrus clementina Ciclev10026635m.g scaffold_7 - View
Cardamine hirsuta CARHR159830 Calmodulin, related Chr5 + View
Carya illinoinensis CiPaw.02G008600 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein Chr02 + View
Citrullus lanatus ClCG02G012810 Calmodulin, related CG_Chr02 + View
Cucumis melo MELO3C020899.2 RCC_reductase domain-containing protein/EF_hand_5 domain-containing protein chr11 - View
Carica papaya Cpa.g.sc55.154 supercontig_55 + View
Capsella rubella Carub.0005s1667 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein scaffold_5 + View
Capsella rubella Carub.0007s0321 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein scaffold_7 + View
Daucus carota DCAR_025730 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_010897 hypothetical protein DCARv2_Chr3 + View
Durio zibethinus Duzib264G1107 NW_019167960.1 + View
Durio zibethinus Duzib147G0217 NW_019168470.1 + View
Durio zibethinus Duzib187G0456 NW_019167860.1 + View
Eutrema salsugineum Thhalv10026403m.g KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein scaffold_1 + View
Fragaria x ananassa FAN19G1900 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein Fvb1-4 - View
Fragaria x ananassa FAN26G1743 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein Fvb1-2 - View
Fragaria vesca FvH4_1g15980 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein Fvb1 - View
Gossypium hirsutum Gohir.D10G096300 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein D10 - View
Gossypium hirsutum Gohir.A10G092100 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein A10 + View
Gossypium hirsutum Gohir.D11G198550 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein D11 - View
Gossypium hirsutum Gohir.D03G022050 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein D03 - View
Gossypium raimondii Gorai.003G023300 Chr03 - View
Gossypium raimondii Gorai.011G105500 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0461F.1_g157830 Hma1.2p1_0461F.1 + View
Lupinus albus Lalb_Chr09g0323161 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein Lalb_Chr09 - View
Lotus japonicus Lj2g0006728 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein chr2 + View
Lonicera japonica Lj4A148G20 GWHAAZE00000004 + View
Malus domestica MD02G1171500 centrin2 Chr02 - View
Malus domestica MD15G1283300 centrin2 Chr15 - View
Manihot esculenta Manes.12G101100 Chromosome12 + View
Manihot esculenta Manes.13G124900 Chromosome13 + View
Nelumbo nucifera Nn5g30315 chr5 + View
Nicotiana tabacum Nitab4.5_0002016g0050 EF-hand domain, EF-Hand 1, calcium-binding site, EF-hand domain pair Nitab4.5_0002016 - View
Petunia axillaris Peaxi162Scf00450g00419 Calcium-binding protein CML19 Peaxi162Scf00450 + View
Punica granatum PGR102G1883 NC_045129.1 + View
Prunus persica Prupe.7G133900 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein Pp07 + View
Papaver somniferum PSO675G3845 NC_039358.1 - View
Papaver somniferum PSO541G6342 NC_039363.1 - View
Populus trichocarpa Potri.005G138000 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein Chr05 - View
Quercus lobata QL06p041468 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0105581 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0100800 chr08 + View
Salix brachista Sabra05G0112700 GWHAAZH00000005 + View
Solanum lycopersicum Solyc02g090810.4 Calcium-binding protein CML19 (AHRD V3.3 *** A0A1U8FSU6_CAPAN) SL4.0ch02 - View
Schrenkiella parvula Sp5g11820 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein ch5-1 - View
Schrenkiella parvula Sp7g34750 KOG0028 - Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein ch7-6 - View
Solanum pennellii Sopen02g035440 centrin2 (CEN2) | FUNCTIONS IN: calcium ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site , EF-HAND 2 , EF-hand-like domain , Calcium-binding EF-hand , EF-hand | BEST Arabidopsis thaliana protein match is: centrin 2 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG402004023 Caltractin ST4.03ch02 + View
Trochodendron aralioides TAR628G0033 group5 + View
Theobroma cacao Thecc.01G055300 ARM repeat protein interacting with ABF2 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104821257 probable calcium-binding protein CML20 NW_010966459.1 + View
Tripterygium wilfordii TWI09G1594 NC_052245.1 - View
Vitis vinifera GSVIVG01022137001 chr7 + View