Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000213 hypothetical protein VITISV_016550 [Vitis vinifera] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15670 LG-6 - View
Aethionema arabicum Aa31LG7G14710 LG-7 - View
Actinidia chinensis Actinidia16044 Lachesis_group11 - View
Arabidopsis lyrata AL4G11260 scaffold_4 + View
Arabidopsis lyrata AL7G11580 scaffold_7 + View
Avicennia marina MSTRG.2530 ScioBoG_102835_HRSCAF_103059 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WB0Z4U 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JNA5NA 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT4G39540 shikimate kinase 2 Encodes a shikimate kinase. Its transcripts appear to be expressed in vegetative tissues and developing embryos. SK2 transcript levels rise in response to Phytophthora infestans spores. SK2 is believed to be localized to the chloroplast. shikimate kinase 2 (SK2)%3B FUNCTIONS IN: shikimate kinase activity%2C ATP binding%3B INVOLVED IN: aromatic amino acid family biosynthetic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623)%3B BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5)%3B Has 7816 Blast hits to 7816 proteins in 2412 species: Archae - 26%3B Bacteria - 5492%3B Metazoa - 45%3B Fungi - 121%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 1970 (source: NCBI BLink). shikimate kinase 2 (SK2)%3B FUNCTIONS IN: shikimate kinase activity%2C ATP binding%3B INVOLVED IN: aromatic amino acid family biosynthetic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623)%3B BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5). Chr4 + View
Arabidopsis thaliana AT2G21940 shikimate kinase 1 Encodes a shikimate kinase. Its transcripts appear to be expressed most highly in mature embryos and senescing leaves%2C and its transcript levels rise during heat stress and recovery. It is believed to be localized to the chloroplast. shikimate kinase 1 (SK1)%3B FUNCTIONS IN: shikimate kinase activity%2C ATP binding%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623)%3B BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2)%3B Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26%3B Bacteria - 5482%3B Metazoa - 44%3B Fungi - 134%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 1983 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB06g27797 ChrB06 + View
Brassica carinata BcaNung00872 Contig372 + View
Brassica carinata BcaC02g08751 ChrC02 - View
Brassica napus A04p16530 A04 + View
Brassica napus C04p51060 C04 + View
Brassica napus A01p00410 A01 + View
Brassica oleracea BolC4t26699H C4 + View
Brassica rapa BraA04t17289Z A04 + View
Brassica rapa BraA01t00050Z A01 + View
Cannabis sativa CANSAT01G1563 NC_044373.1 + View
Cicer arietinum L. Ca_17695_v3 Ca_LG6_v3 + View
Corylus avellana Haze_25044 Similar to SK: Shikimate kinase, chloroplastic (Solanum lycopersicum OX%3D4081) 8 - View
Citrus clementina Ciclev10026159m.g scaffold_7 + View
Carpinus fangiana Cfa018248 Cfa07 - View
Cardamine hirsuta CARHR113020 Shikimate kinase Chr4 + View
Cardamine hirsuta CARHR247190 Shikimate kinase family protein Chr7 - View
Carya illinoinensis CiPaw.03G134200 PTHR21087:SF8 - SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED Chr03 + View
Capsella rubella Carub.0007s0141 2.7.1.71 - Shikimate kinase scaffold_7 + View
Capsella rubella Carub.0004s0108 2.7.1.71 - Shikimate kinase scaffold_4 + View
Durio zibethinus Duzib264G0944 NW_019167960.1 + View
Durio zibethinus Duzib147G0681 NW_019168470.1 + View
Eucalyptus grandis Eucgr.I00321 Chr09 + View
Erythranthe guttata Migut.H02438 scaffold_8 - View
Eutrema salsugineum Thhalv10000262m.g K00891 - shikimate kinase (E2.7.1.71, aroK, aroL) scaffold_15 + View
Fragaria x ananassa FAN19G1247 2.7.1.71 - Shikimate kinase Fvb1-4 - View
Fragaria x ananassa FAN23G2242 2.7.1.71 - Shikimate kinase Fvb1-3 - View
Gossypium hirsutum Gohir.A11G198100 2.7.1.71 - Shikimate kinase A11 - View
Glycine max Glyma.08G141500 2.7.1.71 - Shikimate kinase Gm08 - View
Glycine max Glyma.05G183700 2.7.1.71 - Shikimate kinase Gm05 - View
Gossypium raimondii Gorai.007G244500 Chr07 - View
Lupinus albus Lalb_Chr12g0203521 2.7.1.71 - Shikimate kinase Lalb_Chr12 + View
Lupinus albus Lalb_Chr13g0296211 2.7.1.71 - Shikimate kinase Lalb_Chr13 - View
Lotus japonicus Lj4g0006731 2.7.1.71 - Shikimate kinase chr4 + View
Lotus japonicus Lj1g0011600 2.7.1.71 - Shikimate kinase chr1 + View
Lonicera japonica Lj4C866G0 GWHAAZE00000004 + View
Malus domestica MD15G1332900 shikimate kinase 1 Chr15 + View
Manihot esculenta Manes.12G142800 Chromosome12 - View
Nelumbo nucifera Nn5g28902 chr5 + View
Olea europaea Oeu028369.1 chr18 - View
Oryza sativa ssp. japonica Os02g0749300 Similar to Shikimate kinase, chloroplast precursor (EC 2.7.1.71). chr02 + View
Oryza sativa ssp. japonica Os06g0225800 Shikimate kinase domain containing protein. chr06 - View
Punica granatum PGR004G2752 NC_045131.1 - View
Pisum sativum Psat7g051520 Shikimate kinase chr7LG7 - View
Populus trichocarpa Potri.005G084600 2.7.1.71 - Shikimate kinase Chr05 - View
Phaseolus vulgaris Phvul.002G264800 PTHR21087:SF8 - SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED Chr02 - View
Salix brachista Sabra07G0068000 GWHAAZH00000007 + View
Salix brachista Sabra05G0069700 GWHAAZH00000005 - View
Solanum lycopersicum Solyc04g051860.3 shikimate kinase precursor SL4.0ch04 + View
Schrenkiella parvula Sp4g01020 2.7.1.71 - Shikimate kinase ch4-1 + View
Schrenkiella parvula Sp7g36340 2.7.1.71 - Shikimate kinase ch7-6 - View
Solanum pennellii Sopen04g023190 shikimate kinase 1 (SK1) | FUNCTIONS IN: shikimate kinase activity, ATP binding | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Shikimate kinase | BEST Arabidopsis thaliana protein match is: shikimate kinase 2 Spenn-ch04 + View
Trochodendron aralioides TAR381G1363 group11 - View
Theobroma cacao Thecc.01G113000 Shikimate kinase Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807723 shikimate kinase 1%2C chloroplastic-like NW_010963495.1 - View
Trifolium pratense TPR.G2181 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI74G1314 NC_052234.1 + View
Vigna mungo VMungo0251G3029 CM024069.1 - View
Vigna mungo VMungo1309G0649 CM024072.1 - View
Vitis vinifera GSVIVG01022229001 chr7 - View