Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005495 PREDICTED: probable E3 ubiquitin-protein ligase ARI11 [Vitis vinifera] Chr8 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G2220 LG-6 - View
Acer truncatum Atru.chr10.604 chr10 - View
Actinidia chinensis Actinidia22379 Lachesis_group23 + View
Arabidopsis lyrata AL7G34370 scaffold_7 + View
Avicennia marina MSTRG.16335 ScioBoG_19538_HRSCAF_19626 - View
Arabidopsis thaliana AT4G19670 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C C6HC-type (InterPro:IPR002867)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60250.1)%3B Has 3330 Blast hits to 3305 proteins in 225 species: Archae - 1%3B Bacteria - 6%3B Metazoa - 1257%3B Fungi - 660%3B Plants - 920%3B Viruses - 0%3B Other Eukaryotes - 486 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC06g30628 ChrC06 + View
Brassica carinata BcaNung01758 Contig606 + View
Brassica carinata BcaC09g51386 ChrC09 + View
Brassica napus A01p11590 A01 - View
Brassica napus C01p13680 C01 - View
Brassica oleracea BolC1t01342H C1 - View
Brassica rapa BraA03t14283Z A03 - View
Cicer arietinum L. Ca_18777_v3 Ca_LG6_v3 - View
Corylus avellana Haze_06012 Similar to ARI9: Probable E3 ubiquitin-protein ligase ARI9 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc09_g06790 RING/U-box superfamily protein chr9 - View
Citrus clementina Ciclev10014925m.g scaffold_2 - View
Carpinus fangiana Cfa000730 Cfa01 + View
Cardamine hirsuta CARHR226490 RING zinc finger-containing protein Chr7 - View
Carya illinoinensis CiPaw.10G065900 PF00097//PF01485 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) Chr10 + View
Carya illinoinensis CiPaw.09G079300 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr09 + View
Citrullus lanatus ClCG01G009130 RING/U-box superfamily protein LENGTH=532 CG_Chr01 - View
Carica papaya Cpa.g.sc135.38 supercontig_135 + View
Capsella rubella Carub.0007s2148 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_7 + View
Cucumis sativus L. CsaV3_1G046510 RBR-type E3 ubiquitin transferase chr1 - View
Daucus carota DCAR_004315 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv11865 GWHABJS00000002 + View
Durio zibethinus Duzib235G0173 NW_019167982.1 - View
Erigeron canadensis ECA238G3547 Conyza_canadensis_scaffold:6 - View
Erythranthe guttata Migut.M01965 scaffold_13 - View
Eutrema salsugineum Thhalv10024888m.g PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_1 + View
Fragaria x ananassa FAN21G1375 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria x ananassa FAN25G1512 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN16G2218 PF00097//PF01485//PF13456 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) Fvb3-3 - View
Fragaria x ananassa FAN16G2897 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria vesca FvH4_3g12010 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb3 - View
Gossypium hirsutum Gohir.A06G142060 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A06 - View
Lupinus albus Lalb_Chr16g0385331 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lonicera japonica Lj1A1142T64 GWHAAZE00000001 - View
Malus domestica MD05G1255900 RING/U-box superfamily protein Chr05 + View
Malus domestica MD10G1236000 RING/U-box superfamily protein Chr10 + View
Prunus persica Prupe.4G108300 Pp04 - View
Populus trichocarpa Potri.015G117600 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr15 - View
Populus trichocarpa Potri.012G119000 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr12 - View
Phaseolus vulgaris Phvul.006G131900 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr06 + View
Quercus lobata QL11p018227 11 + View
Rosa chinensis RcHm_v2.0_Chr5g0019691 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0129700 chr13 + View
Salix brachista Sabra12G0089700 GWHAAZH00000012 + View
Salix brachista Sabra15G0135800 GWHAAZH00000015 - View
Sechium edule Sed0016472 LG01 - View
Sechium edule Sed0026999 LG08 + View
Solanum lycopersicum Solyc02g069230.3 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8FJ78_CAPAN) SL4.0ch02 + View
Schrenkiella parvula Sp7g18240 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch7-4 - View
Solanum pennellii Sopen02g018390 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, C6HC-type , Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400021214 Zinc finger protein ST4.03ch02 + View
Trochodendron aralioides TAR626G1690 group3 - View
Trochodendron aralioides TAR627G1088 group6 - View
Theobroma cacao Thecc.06G138800 RING/U-box superfamily protein Chromosome_6 - View
Tarenaya hassleriana THA.LOC104811473 uncharacterized protein LOC104811473 NW_010960187.1 - View
Tripterygium wilfordii TWI38G1261 NC_052252.1 - View
Vaccinium macrocarpon vmacro03500 Similar to RNF217: Probable E3 ubiquitin-protein ligase RNF217 (Homo sapiens OX%3D9606) chr9_Vaccinium_macrocarpon_Stevens_v1 - View