Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031654 Auxin response factor 4 isoform 3 [Theobroma cacao] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12480 LG-1 - View
Acer truncatum Atru.chr3.3675 chr3 + View
Actinidia chinensis Actinidia07120 Lachesis_group13 - View
Actinidia chinensis Actinidia24086 Lachesis_group24 - View
Arabidopsis lyrata AL8G37050 scaffold_8 - View
Avicennia marina MSTRG.18649 ScioBoG_22153_HRSCAF_22259 - View
Amaranthus hybridus Ah.01g002780 Auxin response factor 4 AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy4G03237 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.53DI9J PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EY0R4L PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D4KBLK PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CW97QP PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT5G60450 auxin response factor 4 Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. auxin response factor 4 (ARF4)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: vegetative phase change%2C regulation of transcription%2C DNA-dependent%2C abaxial cell fate specification%3B LOCATED IN: nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525)%2C Transcriptional factor B3 (InterPro:IPR003340)%2C AUX/IAA protein (InterPro:IPR003311)%2C Auxin response factor (InterPro:IPR010525)%3B BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT2G33860.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g13965 ChrC03 + View
Brassica carinata BcaB05g22643 ChrB05 - View
Brassica carinata BcaB08g36342 ChrB08 - View
Brassica carinata BcaC04g19704 ChrC04 - View
Brassica napus C02p11620 C02 + View
Brassica napus C09p53100 C09 - View
Brassica oleracea BolC9t58185H C9 - View
Brassica oleracea BolC2t07259H C2 + View
Brassica rapa BraA02t05722Z A02 + View
Brassica rapa BraA10t43845Z A10 - View
Beta vulgaris EL10Ac9g22485 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G631.7 PGAv.1.6.scaffold631 - View
Cannabis sativa CANSAT54G2880 NC_044375.1 - View
Cicer arietinum L. Ca_19249_v3 Ca_LG6_v3 - View
Corylus avellana Haze_23895 Similar to ARF4: Auxin response factor 4 (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g11410 Auxin response factor 4 chr1 + View
Citrus clementina Ciclev10027839m.g scaffold_8 + View
Cardamine hirsuta CARHR274110 auxin response factor 4 Chr8 - View
Carya illinoinensis CiPaw.14G078400 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Chr14 - View
Carya illinoinensis CiPaw.13G108600 PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Chr13 - View
Citrullus lanatus ClCG02G021030 Auxin response factor, putative CG_Chr02 - View
Cucumis melo MELO3C025758.2 Auxin response factor chr11 - View
Capsella rubella Carub.0008s2114 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 scaffold_8 - View
Cucumis sativus L. CsaV3_6G021720 Auxin response factor chr6 - View
Daucus carota DCAR_015554 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_006053 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv32774 GWHABJS00000010 + View
Durio zibethinus Duzib168G1534 NW_019168159.1 - View
Erigeron canadensis ECA238G1927 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.B02480 Chr02 - View
Eutrema salsugineum Thhalv10012728m.g PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 scaffold_2 + View
Fragaria x ananassa FAN25G2783 PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Fvb3-1 - View
Fragaria x ananassa FAN16G2547 PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Fvb3-3 + View
Fragaria x ananassa FAN21G2647 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Fvb3-2 + View
Fragaria x ananassa FAN11G2115 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Fvb3-4 - View
Fragaria vesca FvH4_3g32860 PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Fvb3 + View
Glycine max Glyma.12G071000 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Gm12 + View
Glycine max Glyma.11G154632 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Gm11 - View
Glycine max Glyma.12G171000 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Gm12 - View
Helianthus annuus HanXRQChr13g0404421 Putative PB1 domain; Auxin response factor; DNA-binding pseudobarrel domain HanXRQChr13 + View
Lupinus albus Lalb_Chr01g0004211 PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Lalb_Chr01 - View
Lupinus albus Lalb_Chr24g0394481 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Lalb_Chr24 - View
Lotus japonicus Lj3g0023515 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 chr3 - View
Lonicera japonica Lj1C187G5 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_6_46381 Lsat_1_v8_lg_6 + View
Malus domestica MD03G1116000 auxin response factor 4 Chr03 + View
Malus domestica MD11G1132400 auxin response factor 4 Chr11 - View
Manihot esculenta Manes.04G024300 Chromosome04 + View
Medicago truncatula Medtr4g060460 auxin response factor-like protein chr4 + View
Medicago truncatula Medtr2g093740 auxin response factor-like protein chr2 - View
Nicotiana tabacum Nitab4.5_0000650g0030 Auxin response factor, DNA-binding pseudobarrel domain, Aux/IAA-ARF-dimerisation, B3 DNA binding domain, AUX/IAA protein Nitab4.5_0000650 - View
Olea europaea Oeu005898.2 chr4 + View
Punica granatum PGR102G1209 NC_045129.1 - View
Prunus persica Prupe.6G097700 Pp06 - View
Pisum sativum Psat5g280080 Auxin response factor chr5LG3 - View
Papaver somniferum PSO339G3376 NC_039366.1 - View
Populus trichocarpa Potri.009G011800 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 Chr09 - View
Phaseolus vulgaris Phvul.011G073600 PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Chr11 - View
Phaseolus vulgaris Phvul.005G136900 Chr05 + View
Quercus lobata QL01p023208 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0060011 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0093300 chr13 - View
Salvia bowleyana SalBow3G1835 GWHASIU00000006 + View
Salvia bowleyana SalBow3G0139 GWHASIU00000006 - View
Solanum lycopersicum Solyc11g069190.2 auxin response factor 4 SL4.0ch11 - View
Schrenkiella parvula Sp6g22030 PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4 ch6-6 - View
Solanum pennellii Sopen11g027930 Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. | auxin response factor 4 (ARF4) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: vegetative phase change, regulation of transcription, DNA-dependent, abaxial cell fate specification | LOCATED IN: nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , Transcriptional factor B3 , AUX/IAA protein , Auxin response factor | BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400008065 Auxin response factor 4 ST4.03ch11 - View
Trochodendron aralioides TAR369G0812 group18 - View
Theobroma cacao Thecc.09G258800 Auxin response factor 4 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104799490 auxin response factor 4 isoform X1 NW_010968505.1 - View
Tarenaya hassleriana THA.LOC104810847 auxin response factor 4-like isoform X1 NW_010965304.1 - View
Trifolium pratense TPR.G11562 Tp57577_TGAC_v2_LG7 - View
Trifolium pratense TPR.G15558 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI56G0085 NC_052242.1 - View
Tripterygium wilfordii TWI74G0435 NC_052234.1 - View
Tripterygium wilfordii TWI31G0961 NC_052233.1 - View
Tripterygium wilfordii TWI79G1013 NC_052238.1 - View
Vaccinium macrocarpon vmacro03185 Similar to ARF4: Auxin response factor 4 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G0789 CM024076.1 - View
Vigna mungo VMungo1080G1130 CM024079.1 - View
Vitis vinifera GSVIVG01025159001 chr6 + View