Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG6G15350 | LG-6 | + | View | |
| Aethionema arabicum | Aa31LG7G14480 | LG-7 | + | View | |
| Acer truncatum | Atru.chr4.47 | chr4 | + | View | |
| Actinidia chinensis | Actinidia28236 | Lachesis_group25 | + | View | |
| Actinidia chinensis | Actinidia28860 | Lachesis_group8 | - | View | |
| Arabidopsis lyrata | AL7G12160 | scaffold_7 | - | View | |
| Arabidopsis lyrata | AL4G11800 | scaffold_4 | - | View | |
| Avicennia marina | MSTRG.2570 | ScioBoG_102835_HRSCAF_103059 | - | View | |
| Amaranthus hybridus | Ah.02g122550 | Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (AtUBP3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) | AmaHy_arrow1_Scaffold_2 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.7P1RA8 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | arahy.Tifrunner.gnm1.Arahy.20 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.R84QR1 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | arahy.Tifrunner.gnm1.Arahy.10 | + | View |
| Arabidopsis thaliana | AT2G22310 | ubiquitin-specific protease 4 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 4 (UBP4)%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1)%3B Has 8879 Blast hits to 7429 proteins in 247 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 4505%3B Fungi - 1682%3B Plants - 966%3B Viruses - 3%3B Other Eukaryotes - 1719 (source: NCBI BLink). | Chr2 | - | View |
| Arabidopsis thaliana | AT4G39910 | ubiquitin-specific protease 3 Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 3 (UBP3)%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr4 | - | View |
| Brassica carinata | BcaNung00912 | Contig372 | - | View | |
| Brassica napus | A01p00810 | A01 | - | View | |
| Brassica rapa | BraA01t00083Z | A01 | - | View | |
| Beta vulgaris | EL10Ac6g15114 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Chr6_EL10_PGA_scaffold0 | - | View |
| Cannabis sativa | CANSAT01G0036 | NC_044373.1 | + | View | |
| Cicer arietinum L. | Ca_17741_v3 | Ca_LG6_v3 | - | View | |
| Coffea canephora | Cc07_g15110 | Ubiquitin carboxyl-terminal hydrolase 3 | chr7 | + | View |
| Citrus clementina | Ciclev10025895m.g | scaffold_7 | - | View | |
| Carpinus fangiana | Cfa002652 | Cfa01 | + | View | |
| Cardamine hirsuta | CARHR113540 | Ubiquitin carboxyl-terminal hydrolase | Chr4 | - | View |
| Cardamine hirsuta | CARHR246780 | Ubiquitin carboxyl-terminal hydrolase | Chr7 | + | View |
| Carya illinoinensis | CiPaw.03G142600 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Chr03 | - | View |
| Carya illinoinensis | CiPaw.04G100400 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Chr04 | - | View |
| Chenopodium quinoa | AUR62002001 | UBP3: Ubiquitin carboxyl-terminal hydrolase 3 | C_Quinoa_Scaffold_4480 | + | View |
| Chenopodium quinoa | AUR62003801 | UBP3: Ubiquitin carboxyl-terminal hydrolase 3 | C_Quinoa_Scaffold_2370 | - | View |
| Capsella rubella | Carub.0004s0147 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | scaffold_4 | - | View |
| Daucus carota | DCAR_014216 | hypothetical protein | DCARv2_Chr4 | - | View |
| Davidia involucrata | Dinv13194 | GWHABJS00000014 | + | View | |
| Davidia involucrata | Dinv21897 | GWHABJS00000021 | + | View | |
| Durio zibethinus | Duzib187G0270 | NW_019167860.1 | - | View | |
| Durio zibethinus | Duzib147G1491 | NW_019168470.1 | - | View | |
| Eucalyptus grandis | Eucgr.I00440 | Chr09 | - | View | |
| Erythranthe guttata | Migut.N01068 | scaffold_14 | - | View | |
| Erythranthe guttata | Migut.H02354 | scaffold_8 | + | View | |
| Eutrema salsugineum | Thhalv10025506m.g | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | scaffold_1 | - | View |
| Eutrema salsugineum | Thhalv10000204m.g | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | scaffold_15 | - | View |
| Fragaria x ananassa | FAN23G1972 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Fvb1-3 | + | View |
| Fragaria x ananassa | FAN28G0114 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Fvb1-1 | - | View |
| Fragaria x ananassa | FAN26G1771 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Fvb1-2 | + | View |
| Fragaria vesca | FvH4_1g20720 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Fvb1 | + | View |
| Gossypium hirsutum | Gohir.A11G202200 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | A11 | - | View |
| Glycine max | Glyma.05G178100 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Gm05 | + | View |
| Glycine max | Glyma.08G135100 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Gm08 | + | View |
| Gossypium raimondii | Gorai.007G237200 | Chr07 | + | View | |
| Lupinus albus | Lalb_Chr12g0203871 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Lalb_Chr12 | - | View |
| Lotus japonicus | Lj6g0008846 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | chr6 | + | View |
| Lotus japonicus | Lj4g0022735 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | chr4 | - | View |
| Lonicera japonica | Lj2A547G21 | GWHAAZE00000002 | + | View | |
| Lonicera japonica | Lj4C892G7 | GWHAAZE00000004 | - | View | |
| Magnolia biondii | MBI02_g35764_MAGBIO | AED:0.39 | Chr02 | - | View |
| Magnolia biondii | MBI05_g37051_MAGBIO | AED:0.19 | Chr05 | - | View |
| Malus domestica | MD01G1031200 | ubiquitin-specific protease 3 | Chr01 | - | View |
| Manihot esculenta | Manes.12G134200 | Chromosome12 | + | View | |
| Manihot esculenta | Manes.13G075650 | Chromosome13 | - | View | |
| Medicago truncatula | Medtr3g087140 | ubiquitin carboxyl-terminal hydrolase | chr3 | + | View |
| Medicago truncatula | Medtr8g090190 | ubiquitin carboxyl-terminal hydrolase | chr8 | + | View |
| Nelumbo nucifera | Nn5g30106 | chr5 | + | View | |
| Prunus persica | Prupe.6G187800 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Pp06 | - | View |
| Pisum sativum | Psat5g090320 | Ubiquitin carboxyl-terminal hydrolase | chr5LG3 | - | View |
| Pisum sativum | Psat7g054480 | Ubiquitin carboxyl-terminal hydrolase | chr7LG7 | + | View |
| Populus trichocarpa | Potri.007G093600 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Chr07 | - | View |
| Populus trichocarpa | Potri.005G074900 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Chr05 | + | View |
| Phaseolus vulgaris | Phvul.002G256600 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | Chr02 | - | View |
| Quercus lobata | QL06p049284 | 6 | + | View | |
| Salix brachista | Sabra05G0061600 | GWHAAZH00000005 | + | View | |
| Salix brachista | Sabra07G0077500 | GWHAAZH00000007 | - | View | |
| Simmondsia chinensis | Sc03g0002060 | GWHAASQ00000003 | + | View | |
| Solanum lycopersicum | Solyc04g056290.3 | Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *** A0A1U8F3J0_CAPAN) | SL4.0ch04 | - | View |
| Schrenkiella parvula | Sp4g01360 | PTHR24006:SF469 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 | ch4-1 | - | View |
| Schrenkiella parvula | Sp7g35980 | K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) | ch7-6 | + | View |
| Solanum pennellii | Sopen04g025180 | Encodes a nuclear ubiquitin-specific protease. | ubiquitin-specific protease 3 (UBP3) | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 | Spenn-ch04 | - | View |
| Selenicereus undatus | Hund13621 | Scaffold_33679 | + | View | |
| Trochodendron aralioides | TAR625G1185 | group4 | - | View | |
| Trochodendron aralioides | TAR376G0991 | group14 | - | View | |
| Trochodendron aralioides | TAR381G1209 | group11 | + | View | |
| Theobroma cacao | Thecc.01G100900 | Ubiquitin-specific protease 3 | Chromosome_1 | + | View |
| Tarenaya hassleriana | THA.LOC104807863 | ubiquitin carboxyl-terminal hydrolase 3 isoform X1 | NW_010963495.1 | + | View |
| Tripterygium wilfordii | TWI74G0008 | NC_052234.1 | + | View | |
| Tripterygium wilfordii | TWI53G0010 | NC_052244.1 | - | View | |
| Vaccinium macrocarpon | vmacro18597 | Similar to UBP4: Ubiquitin carboxyl-terminal hydrolase 4 (Arabidopsis thaliana OX%3D3702) | chr3_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vigna mungo | VMungo1383G3464 | CM024070.1 | - | View | |
| Vigna mungo | VMungo0251G2957 | CM024069.1 | + | View |