Gene: AT2G22310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G22310
  • Transcript Identifier AT2G22310.1
  • Gene Type Coding gene
  • Location Chr2 : 9476733-9478825 : negative

Gene Family Information

  • ID HOM05D002714
  • #Genes/#Species 254/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G22310.1
  • symbol UBP4
  • Alias ATUBP4,ubiquitin-specific protease 4
  • uniprot Q8LAM0

Descriptions

  • Description ubiquitin-specific protease 4
  • Computational description ubiquitin-specific protease 4 (UBP4); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1); Has 8879 Blast hits to 7429 proteins in 247 species: Archae - 0; Bacteria - 4; Metazoa - 4505; Fungi - 1682; Plants - 966; Viruses - 3; Other Eukaryotes - 1719 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IBA
IEA
Gene Ontologyprotein deubiquitination1
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006511
IEA
Gene Ontologyubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IDA
IBA
IEA
Gene Ontologythiol-dependent deubiquitinase1 2
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004197
IBA
Gene Ontologycysteine-type endopeptidase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
IBA
Gene Ontologynucleus1 2
GO:0005829
IBA
Gene Ontologycytosol1
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
19.2.3.1.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP3-4)