Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038569 PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Nelumbo nucifera] Chr15 + View
CSS0017546 PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4850 LG-10 + View
Aethionema arabicum Aa31LG7G9060 LG-7 + View
Acer truncatum Atru.chr9.837 chr9 - View
Actinidia chinensis Actinidia18936 Lachesis_group9 + View
Actinidia chinensis Actinidia16651 Lachesis_group4 - View
Actinidia chinensis Actinidia35086 Lachesis_group2 + View
Actinidia chinensis Actinidia14889 Lachesis_group14 + View
Arabidopsis lyrata AL2G27420 scaffold_2 - View
Arabidopsis lyrata AL2G33690 scaffold_2 + View
Arabidopsis lyrata AL1G39860 scaffold_1 + View
Avicennia marina MSTRG.2236 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.13531 ScioBoG_18778_HRSCAF_18863 + View
Avicennia marina MSTRG.838 ScioBoG_102831_HRSCAF_103044 + View
Aquilegia oxysepala Aqoxy3G00303 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WEZ503 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AY8I6Y PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WVH2H8 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QP34EV PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8MV22J PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZUL46H PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G25440 B-box type zinc finger protein with CCT domain-containing protein B-box type zinc finger protein with CCT domain%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: membrane%3B EXPRESSED IN: leaf%3B CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402)%2C Zinc finger%2C B-box (InterPro:IPR000315)%3B BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1)%3B Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 3380%3B Viruses - 0%3B Other Eukaryotes - 94 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G73870 B-box type zinc finger protein with CCT domain-containing protein B-box type zinc finger protein with CCT domain%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402)%2C Zinc finger%2C B-box (InterPro:IPR000315)%3B BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G25440.1)%3B Has 3347 Blast hits to 2327 proteins in 122 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 3259%3B Viruses - 0%3B Other Eukaryotes - 88 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC03g14961 ChrC03 - View
Brassica carinata BcaC01g01695 ChrC01 - View
Brassica napus C03p72920 C03 + View
Brassica napus A08p26980 A08 - View
Brassica napus A02p15110 A02 - View
Brassica oleracea BolC3t19591H C3 + View
Brassica rapa BraA02t06577Z A02 - View
Brassica rapa BraA08t34644Z A08 - View
Capsicum annuum CAN.G610.87 PGAv.1.6.scaffold610 - View
Cannabis sativa CANSAT01G3252 NC_044373.1 - View
Cicer arietinum L. Ca_11174_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_25449_v3 Ca_LG8_v3 - View
Coffea canephora Cc04_g07160 Putative Zinc finger protein CONSTANS-LIKE 16 chr4 - View
Coffea canephora Cc11_g10150 Putative Zinc finger protein CONSTANS-LIKE 16 chr11 - View
Citrus clementina Ciclev10020440m.g scaffold_3 + View
Citrus clementina Ciclev10015173m.g scaffold_2 - View
Cardamine hirsuta CARHR066970 Zinc finger protein CONSTANS-LIKE 7 Chr2 + View
Carya illinoinensis CiPaw.15G130300 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Chr15 + View
Carya illinoinensis CiPaw.16G085800 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Chr16 + View
Citrullus lanatus ClCG05G022710 Zinc finger protein CONSTANS-LIKE 6 CG_Chr05 - View
Citrullus lanatus ClCG06G014850 CONSTANS-like zinc finger protein CG_Chr06 - View
Cucumis melo MELO3C012248.2 Zinc finger constans-like protein chr10 - View
Cucumis melo MELO3C017304.2 zinc finger protein CONSTANS-LIKE 16 chr02 - View
Carica papaya Cpa.g.sc3.516 supercontig_3 - View
Chenopodium quinoa AUR62002867 COL6: Zinc finger protein CONSTANS-LIKE 6 C_Quinoa_Scaffold_1000 + View
Capsella rubella Carub.0002s2063 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED scaffold_2 + View
Capsella rubella Carub.0001s2505 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) scaffold_1 + View
Cucumis sativus L. CsaV3_5G034320 Zinc finger constans-like protein chr5 + View
Daucus carota DCAR_015140 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_023659 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_030155 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv09797 GWHABJS00000006 - View
Davidia involucrata Dinv21086 GWHABJS00000018 + View
Davidia involucrata Dinv28098 GWHABJS00000019 - View
Durio zibethinus Duzib205G0636 NW_019168381.1 - View
Durio zibethinus Duzib248G1208 NW_019168048.1 + View
Durio zibethinus Duzib084G0515 NW_019167827.1 + View
Durio zibethinus Duzib251G0361 NW_019167971.1 - View
Durio zibethinus Duzib068G1015 NW_019167838.1 + View
Erigeron canadensis ECA246G3575 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA233G1916 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.G02322 Chr07 - View
Eucalyptus grandis Eucgr.B00721 Chr02 - View
Erythranthe guttata Migut.L01064 scaffold_12 - View
Erythranthe guttata Migut.E00340 scaffold_5 + View
Eutrema salsugineum Thhalv10007685m.g PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) scaffold_5 - View
Fragaria x ananassa FAN08G2620 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb5-3 + View
Fragaria x ananassa FAN04G2513 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb5-4 - View
Fragaria x ananassa FAN13G0527 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb5-2 - View
Fragaria x ananassa FAN18G2509 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb5-1 - View
Fragaria x ananassa FAN07G0493 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb4-4 + View
Fragaria x ananassa FAN18G3399 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb5-1 - View
Fragaria x ananassa FAN22G1861 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb4-1 - View
Fragaria vesca FvH4_5g12150 KOG1601 - GATA-4/5/6 transcription factors Fvb5 - View
Fragaria vesca FvH4_4g27390 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Fvb4 - View
Gossypium hirsutum Gohir.A09G047500 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) A09 + View
Glycine max Glyma.05G233700 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Gm05 + View
Glycine max Glyma.07G091400 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Gm07 + View
Glycine max Glyma.08G041100 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Gm08 + View
Glycine max Glyma.09G184600 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Gm09 - View
Glycine max Glyma.20G115600 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Gm20 + View
Glycine max Glyma.10G274300 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Gm10 - View
Gossypium raimondii Gorai.006G061600 Chr06 + View
Helianthus annuus HanXRQChr17g0552071 Probable B-box type zinc finger protein with CCT domain HanXRQChr17 + View
Hydrangea macrophylla Hma1.2p1_0061F.1_g033920 Hma1.2p1_0061F.1 - View
Lupinus albus Lalb_Chr21g0308941 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Lalb_Chr21 - View
Lupinus albus Lalb_Chr05g0222511 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Lalb_Chr05 - View
Lupinus albus Lalb_Chr02g0146001 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Lalb_Chr02 - View
Lotus japonicus Lj5g0019912 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) chr5 + View
Lotus japonicus Lj2g0004218 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) chr2 + View
Lotus japonicus Lj4g0020741 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED chr4 - View
Lonicera japonica Lj5C148T4 GWHAAZE00000005 + View
Lonicera japonica Lj9A426T60 GWHAAZE00000009 - View
Lonicera japonica Lj6A759T75 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_3_59241 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Lsat_1_v8_lg_3 - View
Malus domestica MD06G1215800 B-box type zinc finger protein with CCT domain Chr06 + View
Malus domestica MD16G1043000 B-box type zinc finger protein with CCT domain Chr16 - View
Malus domestica MD14G1226400 B-box type zinc finger protein with CCT domain Chr14 + View
Malus domestica MD13G1042200 B-box type zinc finger protein with CCT domain Chr13 - View
Manihot esculenta Manes.05G137600 Chromosome05 + View
Manihot esculenta Manes.01G012000 Chromosome01 + View
Manihot esculenta Manes.14G102400 Chromosome14 + View
Manihot esculenta Manes.06G068600 Chromosome06 - View
Medicago truncatula Medtr8g104190 zinc finger constans-like protein chr8 + View
Medicago truncatula Medtr1g110870 zinc finger constans-like protein chr1 - View
Nelumbo nucifera Nn3g17837 chr3 + View
Nicotiana tabacum Nitab4.5_0000974g0020 CCT domain, Zinc finger, B-box Nitab4.5_0000974 - View
Nicotiana tabacum Nitab4.5_0000057g0280 Zinc finger, B-box, CCT domain Nitab4.5_0000057 - View
Petunia axillaris Peaxi162Scf00015g00927 Zinc finger protein CONSTANS-LIKE 16 Peaxi162Scf00015 + View
Punica granatum PGR119G0346 NC_045132.1 - View
Punica granatum PGR083G2831 NC_045133.1 + View
Prunus persica Prupe.5G221000 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Pp05 + View
Prunus persica Prupe.1G310900 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Pp01 + View
Populus trichocarpa Potri.010G125100 KOG1601 - GATA-4/5/6 transcription factors Chr10 - View
Populus trichocarpa Potri.008G120400 KOG1601 - GATA-4/5/6 transcription factors Chr08 + View
Phaseolus vulgaris Phvul.007G027200 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Chr07 + View
Phaseolus vulgaris Phvul.002G316100 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Chr02 + View
Phaseolus vulgaris Phvul.004G157300 PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Chr04 - View
Quercus lobata QL10p025240 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0185411 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr4g0435191 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim09G0108100 chr09 - View
Rhododendron simsii Rhsim12G0143500 chr12 - View
Salix brachista Sabra08G0091400 GWHAAZH00000008 + View
Salix brachista Sabra10G0095000 GWHAAZH00000010 - View
Sechium edule Sed0013896 LG07 + View
Sechium edule Sed0023618 LG08 + View
Sechium edule Sed0007705 LG03 - View
Solanum lycopersicum Solyc04g007210.3 Zinc finger protein CONSTANS-LIKE 7 (AHRD V3.3 *** A0A2G2VK65_CAPBA) SL4.0ch04 - View
Solanum lycopersicum Solyc05g009310.3 Zinc finger protein CONSTANS-LIKE 7 (AHRD V3.3 *** A0A2G2VK65_CAPBA) SL4.0ch05 + View
Solanum lycopersicum Solyc03g119540.3 Zinc finger protein (AHRD V3.3 *** A0A200Q3F7_9MAGN) SL4.0ch03 - View
Schrenkiella parvula Sp1g22770 PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) ch1-1 + View
Solanum pennellii Sopen04g002270 B-box type zinc finger protein with CCT domain | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding | INVOLVED IN: regulation of transcription | LOCATED IN: membrane | EXPRESSED IN: leaf | CONTAINS InterPro DOMAIN/s: CCT domain , Zinc finger, B-box | BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain Spenn-ch04 - View
Solanum pennellii Sopen03g038370 B-box type zinc finger protein with CCT domain | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: CCT domain , Zinc finger, B-box | BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400005633 Conserved gene of unknown function ST4.03ch03 - View
Selenicereus undatus Hund25064 Scaffold_3410 + View
Selenicereus undatus Hund20806 Scaffold_33673 + View
Trochodendron aralioides TAR371G0621 group13 - View
Trochodendron aralioides TAR622G0070 group8 - View
Trochodendron aralioides TAR374G0409 group12 + View
Theobroma cacao Thecc.03G034600 Transcription factor Chromosome_3 + View
Theobroma cacao Thecc.02G231000 B-box type zinc finger protein with CCT domain Chromosome_2 - View
Trifolium pratense TPR.G32690 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI79G1170 NC_052238.1 - View
Tripterygium wilfordii TWI60G1239 NC_052246.1 - View
Tripterygium wilfordii TWI31G0677 NC_052233.1 - View
Vaccinium macrocarpon vmacro16449 Similar to COL16: Zinc finger protein CONSTANS-LIKE 16 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0433 CM024071.1 - View
Vigna mungo VMungo0251G2136 CM024069.1 + View
Vigna mungo VMungo0464G1761 CM024077.1 - View
Vitis vinifera GSVIVG01011897001 chr1 + View