Gene: Carub.0002s2063

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s2063
  • Transcript Identifier Carub.0002s2063.1
  • Gene Type Coding gene
  • Location scaffold_2 : 11359150-11360488 : positive

Gene Family Information

  • ID HOM05D001106
  • #Genes/#Species 553/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s2063.v1.1
  • pacid 39243456
  • synonym Carubv10020393m.g

Descriptions

  • Description PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G73870
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G73870
GO:0009641
ISO
PLAZA Integrative Orthologyshade avoidance AT1G73870
GO:0010223
ISO
PLAZA Integrative Orthologysecondary shoot formation AT1G73870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
InterProzinc ion binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G73870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G73870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010402 CCT domain
IPR000315 B-box-type zinc finger
Mapman id Description
15.5.1.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO)