Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia09721 Lachesis_group5 + View
Arabidopsis lyrata AL1G14880 scaffold_1 - View
Avicennia marina MSTRG.14849 ScioBoG_19538_HRSCAF_19626 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PKYP8C K15083 - DNA repair protein RAD16 (RAD16) arahy.Tifrunner.gnm1.Arahy.18 - View
Arabidopsis thaliana AT1G05120 Helicase protein with RING/U-box domain-containing protein Helicase protein with RING/U-box domain%3B FUNCTIONS IN: helicase activity%2C DNA binding%2C zinc ion binding%2C ATP binding%2C nucleic acid binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1)%3B Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124%3B Bacteria - 8622%3B Metazoa - 6656%3B Fungi - 6694%3B Plants - 2674%3B Viruses - 189%3B Other Eukaryotes - 4259 (source: NCBI BLink). Chr1 - View
Brassica napus A10p03620 A10 - View
Brassica napus C05p03300 C05 - View
Brassica oleracea BolC5t29111H C5 - View
Brassica rapa BraA10t42638Z A10 - View
Corylus avellana Haze_12844 Similar to CHR28: Helicase-like transcription factor CHR28 (Arabidopsis thaliana OX%3D3702) 5 - View
Carpinus fangiana Cfa014380 Cfa06 - View
Cardamine hirsuta CARHR004580 DNA repair helicase, putative Chr1 - View
Carya illinoinensis CiPaw.03G158800 K15083 - DNA repair protein RAD16 (RAD16) Chr03 - View
Citrullus lanatus ClCG02G008890 DNA repair helicase, putative CG_Chr02 + View
Capsella rubella Carub.0001s0440 K15083 - DNA repair protein RAD16 (RAD16) scaffold_1 - View
Daucus carota DCAR_021168 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv05415 GWHABJS00000013 - View
Eucalyptus grandis Eucgr.K00791 Chr11 - View
Erythranthe guttata Migut.M00457 scaffold_13 - View
Eutrema salsugineum Thhalv10006803m.g K15083 - DNA repair protein RAD16 (RAD16) scaffold_5 + View
Fragaria x ananassa FAN05G2156 K15083 - DNA repair protein RAD16 (RAD16) Fvb6-3 + View
Fragaria x ananassa FAN02G1785 K15083 - DNA repair protein RAD16 (RAD16) Fvb6-4 - View
Fragaria x ananassa FAN14G5677 PTHR10799//PTHR10799:SF763 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN09G0988 K15083 - DNA repair protein RAD16 (RAD16) Fvb6-2 + View
Fragaria vesca FvH4_6g42970 K15083 - DNA repair protein RAD16 (RAD16) Fvb6 - View
Glycine max Glyma.13G309700 K15083 - DNA repair protein RAD16 (RAD16) Gm13 + View
Glycine max Glyma.12G180800 K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) Gm12 + View
Glycine max Glyma.12G192700 K15083 - DNA repair protein RAD16 (RAD16) Gm12 - View
Lotus japonicus Lj3g0007388 PF00176//PF00271//PF13920 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) chr3 + View
Lotus japonicus Lj3g0010715 PTHR10799//PTHR10799:SF763 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED chr3 + View
Malus domestica MD17G1098500 Helicase protein with RING/U-box domain Chr17 + View
Manihot esculenta Manes.12G073600 Chromosome12 - View
Medicago truncatula Medtr4g049500 RING/U-box helicase chr4 + View
Nelumbo nucifera Nn1g03471 chr1 - View
Punica granatum PGR142G0089 NC_045128.1 + View
Prunus persica Prupe.3G215900 Pp03 - View
Populus trichocarpa Potri.014G154600 K15083 - DNA repair protein RAD16 (RAD16) Chr14 + View
Phaseolus vulgaris Phvul.005G115700 K15083 - DNA repair protein RAD16 (RAD16) Chr05 + View
Striga asiatica SGA_v2.0_scaffold70G23407 scaffold70 + View
Salix brachista Sabra14G0116900 GWHAAZH00000014 + View
Simmondsia chinensis Sc21g0001380 GWHAASQ00000021 - View
Solanum lycopersicum Solyc07g051960.3 SNF2-related (AHRD V3.3 *-* A0A200QH53_9MAGN) SL4.0ch07 + View
Schrenkiella parvula Sp1g03980 K15083 - DNA repair protein RAD16 (RAD16) ch1-1 - View
Solanum pennellii Sopen07g025550 Helicase protein with RING/U-box domain | FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein Spenn-ch07 + View
Trochodendron aralioides TAR624G1394 group9 + View
Tarenaya hassleriana THA.LOC104800996 DNA repair protein RAD16 isoform X1 NW_010969548.1 + View
Tripterygium wilfordii TWI75G1770 NC_052253.1 + View
Vaccinium macrocarpon vmacro12195 Similar to rhp16: ATP-dependent helicase rhp16 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0557 CM024079.1 - View
Vitis vinifera GSVIVG01030444001 chr12 + View