Gene: Sp1g03980
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp1g03980
- Transcript Identifier Sp1g03980.1
- Gene Type Coding gene
- Location ch1-1 : 1371414-1375389 : negative
Gene Family Information
- ID HOM05D000515
- #Genes/#Species 1048/100
- Phylogenetic origin
- ID ORTHO05D003530
- #Genes/#Species 218/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Sp1g03980.v2.2
- pacid 45094736
Descriptions
- Description K15083 - DNA repair protein RAD16 (RAD16)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc05g044480.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc05g044480.3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR001650 | Helicase, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001841 | Zinc finger, RING-type |
| IPR000330 | SNF2, N-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR018957 | Zinc finger, C3HC4 RING-type |
| Mapman id | Description |
|---|---|
| 12.4.8.3.2 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5-like) |