Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG8G15550 | LG-8 | + | View | |
Actinidia chinensis | Actinidia35650 | Lachesis_group25 | + | View | |
Actinidia chinensis | Actinidia19172 | Lachesis_group8 | - | View | |
Arabidopsis lyrata | AL3G51840 | scaffold_3 | - | View | |
Avicennia marina | MSTRG.23540 | ScioBoG_3895_HRSCAF_3912 | - | View | |
Amaranthus hybridus | Ah.03g139440 | Splicing factor 3B subunit 4 (Pre-mRNA-splicing factor SF3b 49 kDa subunit) (Spliceosome-associated protein 49) (SAP 49) | AmaHy_arrow1_Scaffold_3 | - | View |
Aquilegia oxysepala | Aqoxy5G01673 | CHR05 | - | View | |
Arabidopsis thaliana | AT2G18510 | RNA-binding (RRM/RBD/RNP motifs) family protein embryo defective 2444 (emb2444)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2)%3B Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50%3B Bacteria - 5635%3B Metazoa - 30219%3B Fungi - 10282%3B Plants - 12025%3B Viruses - 917%3B Other Eukaryotes - 7701 (source: NCBI BLink). | Chr2 | - | View |
Brassica carinata | BcaC04g22900 | ChrC04 | + | View | |
Brassica carinata | BcaB03g16632 | ChrB03 | + | View | |
Brassica carinata | BcaB07g31658 | ChrB07 | + | View | |
Brassica carinata | BcaC06g36421 | ChrC06 | - | View | |
Brassica napus | A07p02180 | A07 | + | View | |
Brassica napus | C07p04290 | C07 | + | View | |
Brassica oleracea | BolC7t40824H | C7 | + | View | |
Brassica oleracea | BolC9t54303H | C9 | - | View | |
Brassica rapa | BraA07t28012Z | A07 | + | View | |
Beta vulgaris | EL10Ac6g14921 | PTHR24012//PTHR24012:SF449 - FAMILY NOT NAMED // SPLICING FACTOR 3B SUBUNIT 4 | Chr6_EL10_PGA_scaffold0 | + | View |
Cannabis sativa | CANSAT01G1769 | NC_044373.1 | + | View | |
Coffea canephora | Cc07_g09270 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr7 | + | View |
Citrus clementina | Ciclev10025862m.g | scaffold_7 | - | View | |
Ceratophyllum demersum | CDE07G0828 | 5 | + | View | |
Ceratophyllum demersum | CDE04G3638 | 2 | - | View | |
Cardamine hirsuta | CARHR109120 | Splicing factor 3B subunit | Chr3 | - | View |
Carya illinoinensis | CiPaw.02G015800 | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | Chr02 | + | View |
Carya illinoinensis | CiPaw.01G035300 | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | Chr01 | + | View |
Chenopodium quinoa | AUR62003178 | SF3B4: Splicing factor 3B subunit 4 | C_Quinoa_Scaffold_1000 | - | View |
Chenopodium quinoa | AUR62007997 | SF3B4: Splicing factor 3B subunit 4 | C_Quinoa_Scaffold_2646 | - | View |
Capsella rubella | Carub.0003s3271 | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | scaffold_3 | - | View |
Daucus carota | DCAR_025927 | hypothetical protein | DCARv2_Chr7 | - | View |
Davidia involucrata | Dinv39964 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib264G0582 | NW_019167960.1 | + | View | |
Durio zibethinus | Duzib147G0139 | NW_019168470.1 | + | View | |
Erythranthe guttata | Migut.L00293 | scaffold_12 | - | View | |
Eutrema salsugineum | Thhalv10023032m.g | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | scaffold_11 | + | View |
Gossypium hirsutum | Gohir.D10G093100 | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | D10 | - | View |
Gossypium raimondii | Gorai.011G102300 | Chr11 | - | View | |
Lonicera japonica | Lj4C198T4 | GWHAAZE00000004 | + | View | |
Magnolia biondii | MBI16_g35646_MAGBIO | AED:0.11 | Chr16 | + | View |
Olea europaea | Oeu023830.4 | chr7 | - | View | |
Papaver somniferum | PSO541G5970 | NC_039363.1 | - | View | |
Papaver somniferum | PSO675G4237 | NC_039358.1 | + | View | |
Populus trichocarpa | Potri.005G125300 | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | Chr05 | - | View |
Populus trichocarpa | Potri.007G028300 | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | Chr07 | - | View |
Quercus lobata | QL06p045519 | 6 | + | View | |
Salix brachista | Sabra07G0024500 | GWHAAZH00000007 | - | View | |
Salix brachista | Sabra05G0102900 | GWHAAZH00000005 | - | View | |
Simmondsia chinensis | Sc03g0000830 | GWHAASQ00000003 | - | View | |
Schrenkiella parvula | Sp3g31970 | K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) | ch3-6 | - | View |
Selenicereus undatus | Hund14143 | Scaffold_33679 | + | View | |
Selenicereus undatus | Hund16583 | Scaffold_33677 | + | View | |
Trochodendron aralioides | TAR376G0105 | group14 | + | View | |
Trochodendron aralioides | TAR625G0488 | group4 | - | View | |
Trochodendron aralioides | TAR628G0051 | group5 | + | View | |
Theobroma cacao | Thecc.01G038800 | RNA-binding family protein | Chromosome_1 | - | View |
Tarenaya hassleriana | THA.LOC104819794 | splicing factor 3B subunit 4 | NW_010966177.1 | - | View |
Tripterygium wilfordii | TWI53G1177 | NC_052244.1 | + | View | |
Tripterygium wilfordii | TWI09G0303 | NC_052245.1 | + | View | |
Utricularia gibba | unitig_736.g22538 | unitig_736 | + | View | |
Vaccinium macrocarpon | vmacro17854 | Similar to SF3B4: Splicing factor 3B subunit 4 (Homo sapiens OX%3D9606) | chr3_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01018991001 | chr4 | + | View |