Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0013255 hypothetical protein CICLE_v10031219mg [Citrus clementina] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.1896 chr6 + View
Actinidia chinensis Actinidia08902 Lachesis_group2 - View
Actinidia chinensis Actinidia30597 Lachesis_group10 - View
Arabidopsis lyrata AL1G41610 scaffold_1 + View
Amaranthus hybridus Ah.03g135630 RNA polymerase II C-terminal domain phosphatase-like 3 (FCP-like 3) (EC 3.1.3.16) (Carboxyl-terminal phosphatase-like 3) (AtCPL3) (CTD phosphatase-like 3) AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.46XLY6 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G28090 Polynucleotide adenylyltransferase family protein Polynucleotide adenylyltransferase family protein%3B FUNCTIONS IN: RNA binding%2C nucleotidyltransferase activity%3B INVOLVED IN: RNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Poly A polymerase%2C head domain (InterPro:IPR002646)%3B BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT5G23690.1)%3B Has 9340 Blast hits to 9332 proteins in 2600 species: Archae - 2%3B Bacteria - 6572%3B Metazoa - 129%3B Fungi - 227%3B Plants - 128%3B Viruses - 8%3B Other Eukaryotes - 2274 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g26812 ChrC05 + View
Brassica napus C05p26790 C05 + View
Brassica napus A09p37970 A09 - View
Brassica oleracea BolC5t31400H C5 + View
Beta vulgaris EL10Ac5g11321 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Chr5_EL10_PGA_scaffold2 - View
Beta vulgaris EL10Ac6g13592 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT01G0009 NC_044373.1 + View
Corylus avellana Haze_07118 Protein of unknown function 4 - View
Corylus avellana Haze_12482 Similar to LFL1: B3 domain-containing protein LFL1 (Oryza sativa subsp. japonica OX%3D39947) 9 + View
Citrus clementina Ciclev10031219m.g scaffold_4 + View
Citrus clementina Ciclev10033787m.g scaffold_4 + View
Carpinus fangiana Cfa018725 Cfa08 - View
Carpinus fangiana Cfa009431 Cfa03 + View
Carya illinoinensis CiPaw.05G103200 PTHR13734:SF47 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Chr05 - View
Carya illinoinensis CiPaw.11G001700 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Chr11 - View
Citrullus lanatus ClCG06G018260 Polynucleotide adenylyltransferase family protein CG_Chr06 + View
Citrullus lanatus ClCG07G011850 CCA-adding enzyme CG_Chr07 + View
Cucumis melo MELO3C017806.2 poly(A) polymerase I-like chr07 + View
Cucumis melo MELO3C026172.2 Poly(A) polymerase chr02 + View
Chenopodium quinoa AUR62005700 pcnB: Poly(A) polymerase I C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62029454 pcnB: Poly(A) polymerase I C_Quinoa_Scaffold_3036 - View
Chenopodium quinoa AUR62028855 pcnB: Poly(A) polymerase I C_Quinoa_Scaffold_2837 - View
Cucumis sativus L. CsaV3_4G002360 Poly(A) polymerase i chr4 - View
Cucumis sativus L. CsaV3_1G000170 Poly(A) polymerase i chr1 - View
Davidia involucrata Dinv11222 GWHABJS00000006 + View
Durio zibethinus Duzib068G1277 NW_019167838.1 + View
Durio zibethinus Duzib205G0469 NW_019168381.1 + View
Erigeron canadensis ECA232G2131 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA233G2879 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.G01958 Chr07 + View
Eutrema salsugineum Thhalv10007307m.g PTHR13734:SF47 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED scaffold_5 - View
Fragaria x ananassa FAN04G0231 Fvb5-4 + View
Fragaria x ananassa FAN18G0984 PTHR13734:SF47 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Fvb5-1 + View
Fragaria x ananassa FAN08G2001 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Fvb5-3 - View
Fragaria x ananassa FAN13G1306 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Fvb5-2 + View
Fragaria vesca FvH4_5g09150 PTHR13734:SF47 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Fvb5 + View
Gossypium hirsutum Gohir.A12G193200 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED A12 + View
Gossypium hirsutum Gohir.D12G195300 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED D12 + View
Glycine max Glyma.05G201500 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Gm05 - View
Glycine max Glyma.08G009000 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Gm08 - View
Glycine max Glyma.04G200000 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Gm04 + View
Glycine max Glyma.06G165602 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Gm06 - View
Gossypium raimondii Gorai.008G210000 Chr08 + View
Lupinus albus Lalb_Chr07g0183731 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Lalb_Chr07 + View
Lupinus albus Lalb_Chr08g0237451 PTHR13734:SF47 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Lalb_Chr08 + View
Lotus japonicus Lj1g0008979 PTHR13734:SF47 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED chr1 + View
Lonicera japonica Lj5A89G35 GWHAAZE00000005 - View
Lonicera japonica Lj6A836G33 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_8_147080 Lsat_1_v8_lg_8 + View
Malus domestica MD06G1133100 Polynucleotide adenylyltransferase family protein Chr06 - View
Malus domestica MD14G1149300 Polynucleotide adenylyltransferase family protein Chr14 - View
Manihot esculenta Manes.06G125200 Chromosome06 + View
Manihot esculenta Manes.14G046200 Chromosome14 - View
Medicago truncatula Medtr8g099900 tRNA nucleotidyltransferase/poly(A) polymerase chr8 - View
Medicago truncatula Medtr3g498785 tRNA nucleotidyltransferase/poly(A) polymerase chr3 - View
Nelumbo nucifera Nn4g22180 chr4 - View
Oryza sativa ssp. japonica Os04g0395900 Polynucleotide adenylyltransferase region domain containing protein. chr04 - View
Prunus persica Prupe.5G144000 PTHR13734:SF47 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Pp05 - View
Pisum sativum Psat7g038840 Poly A polymerase head domain chr7LG7 + View
Papaver somniferum PSO017G1089 NC_039362.1 - View
Papaver somniferum PSO478G0961 NC_039361.1 - View
Populus trichocarpa Potri.012G105000 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Chr12 + View
Populus trichocarpa Potri.015G104300 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Chr15 + View
Populus trichocarpa Potri.003G164400 PTHR13734//PTHR13734:SF47 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE DOMAIN AND RNA RECOGNITION MOTIF-CONTAINING PROTEIN-RELATED Chr03 - View
Phaseolus vulgaris Phvul.002G283000 Chr02 - View
Quercus lobata QL10p001008 10 - View
Quercus lobata QL03p049872 3 - View
Rosa chinensis RcHm_v2.0_Chr7g0189011 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim12G0180200 chr12 + View
Rhododendron simsii Rhsim12G0018600 chr12 - View
Salix brachista Sabra12G0077400 GWHAAZH00000012 + View
Salix brachista Sabra03G0119600 GWHAAZH00000003 - View
Solanum lycopersicum Solyc03g097830.3 Poly(A) polymerase I (AHRD V3.3 *** A0A1J3FW86_NOCCA) SL4.0ch03 + View
Solanum pennellii Sopen03g028570 Polynucleotide adenylyltransferase family protein | FUNCTIONS IN: RNA binding, nucleotidyltransferase activity | INVOLVED IN: RNA processing | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain | BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein Spenn-ch03 + View
Solanum pennellii Sopen01g005190 Polynucleotide adenylyltransferase family protein | FUNCTIONS IN: RNA binding, nucleotidyltransferase activity | INVOLVED IN: RNA processing | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain | BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400019856 Poly(A) polymerase ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400030005 Poly(A) polymerase ST4.03ch01 - View
Selenicereus undatus Hund02490 Scaffold_33678 - View
Selenicereus undatus Hund06123 Scaffold_19641 + View
Trochodendron aralioides TAR622G1337 group8 + View
Theobroma cacao Thecc.03G138100 Polynucleotide adenylyltransferase family protein Chromosome_3 + View
Trifolium pratense TPR.G21594 Tp57577_TGAC_v2_LG3 - View
Trifolium pratense TPR.G12979 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI36G0753 NC_052237.1 - View
Tripterygium wilfordii TWI23G0364 NC_052239.1 - View
Vaccinium macrocarpon vmacro01029 Similar to pcnB: Poly(A) polymerase I (Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX%3D71421) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G2654 CM024069.1 - View