Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004712 PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] Chr2 - View
CSS0012483 PREDICTED: protein BASIC PENTACYSTEINE6-like [Sesamum indicum] Chr1 + View
CSS0007067 Protein BASIC PENTACYSTEINE6 [Glycine soja] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16340 LG-6 + View
Acer truncatum Atru.chr13.337 chr13 - View
Actinidia chinensis Actinidia15396 Lachesis_group26 - View
Actinidia chinensis Actinidia20474 Lachesis_group25 - View
Arabidopsis lyrata AL7G10800 scaffold_7 - View
Arabidopsis lyrata AL4G10380 scaffold_4 - View
Avicennia marina MSTRG.27661 ScioBoG_94932_HRSCAF_95134 + View
Amaranthus hybridus Ah.01g018680 Protein BASIC PENTACYSTEINE4 (AtBPC4) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy6G02331 CHR06 - View
Aquilegia oxysepala Aqoxy5G01469 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E4SR7P PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT4G38910 basic pentacysteine 5 Encodes a basic pentacysteine protein that is localized to the nucleus and specifically binds in vitro to GA dinucleotide repeats. basic pentacysteine 5 (BPC5)%3B CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409)%3B BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2)%3B Has 238 Blast hits to 238 proteins in 23 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 2%3B Fungi - 0%3B Plants - 234%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT2G21240 basic pentacysteine 4 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 4 (BPC4)%3B CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409)%3B BEST Arabidopsis thaliana protein match is: basic pentacysteine 5 (TAIR:AT4G38910.2)%3B Has 263 Blast hits to 247 proteins in 33 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 40%3B Fungi - 0%3B Plants - 219%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB08g34976 ChrB08 - View
Brassica carinata BcaC01g00264 ChrC01 - View
Brassica carinata BcaB03g12232 ChrB03 - View
Brassica carinata BcaC07g41162 ChrC07 + View
Brassica carinata BcaNung01295 Contig480 + View
Brassica napus A04p16030 A04 - View
Brassica napus C01p00180 C01 - View
Brassica napus C08p41700 C08 + View
Brassica napus C03p77400 C03 - View
Brassica napus C07p63500 C07 + View
Brassica napus C04p50460 C04 - View
Brassica oleracea BolC4t26643H C4 - View
Brassica oleracea BolC3t19996H C3 - View
Brassica oleracea BolC7t46764H C7 + View
Brassica oleracea BolC1t00023H C1 - View
Brassica rapa BraA08t34352Z A08 + View
Beta vulgaris EL10Ac9g21622 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G170.109 PGAv.1.6.scaffold170 + View
Cannabis sativa CANSAT25G0271 NC_044370.1 + View
Cannabis sativa CANSAT11G2086 NC_044377.1 - View
Corylus avellana Haze_22602 Similar to BPC6: Protein BASIC PENTACYSTEINE6 (Arabidopsis thaliana OX%3D3702) 3 + View
Corylus avellana Haze_02229 Similar to BPC4: Protein BASIC PENTACYSTEINE4 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc10_g01980 Protein BASIC PENTACYSTEINE6 chr10 + View
Coffea canephora Cc02_g16840 Protein BASIC PENTACYSTEINE4 chr2 - View
Citrus clementina Ciclev10001400m.g scaffold_5 + View
Citrus clementina Ciclev10028887m.g scaffold_8 + View
Carpinus fangiana Cfa005120 Cfa02 + View
Cardamine hirsuta CARHR247850 GAGA-binding transcriptional activator Chr7 + View
Cardamine hirsuta CARHR112110 GAGA-binding transcriptional activator Chr4 - View
Carya illinoinensis CiPaw.07G153000 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr07 - View
Carya illinoinensis CiPaw.08G063900 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr08 + View
Carya illinoinensis CiPaw.06G127500 PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED Chr06 - View
Carya illinoinensis CiPaw.05G074100 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Chr05 + View
Citrullus lanatus ClCG08G014430 GAGA-binding transcriptional activator CG_Chr08 - View
Citrullus lanatus ClCG02G004470 GAGA-binding transcriptional activator CG_Chr02 - View
Cucumis melo MELO3C010996.2 GAGA-binding transcriptional activator chr03 - View
Cucumis melo MELO3C013409.2 GAGA-binding transcriptional activator chr01 - View
Carica papaya Cpa.g.sc150.9 supercontig_150 - View
Chenopodium quinoa AUR62014407 BPC6: Protein BASIC PENTACYSTEINE6 C_Quinoa_Scaffold_1566 - View
Chenopodium quinoa AUR62010370 Protein of unknown function C_Quinoa_Scaffold_1257 - View
Chenopodium quinoa AUR62016847 BPC4: Protein BASIC PENTACYSTEINE4 C_Quinoa_Scaffold_3670 + View
Capsella rubella Carub.0004s0029 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_7G000490 protein BASIC PENTACYSTEINE4-like chr7 + View
Davidia involucrata Dinv23448 GWHABJS00000005 - View
Davidia involucrata Dinv31820 GWHABJS00000002 + View
Davidia involucrata Dinv41991 GWHABJS00000002 + View
Durio zibethinus Duzib052G1043 NW_019167849.1 + View
Durio zibethinus Duzib093G1191 NW_019167937.1 + View
Durio zibethinus Duzib132G0176 NW_019167915.1 - View
Durio zibethinus Duzib041G0420 NW_019167826.1 - View
Durio zibethinus Duzib248G0498 NW_019168048.1 + View
Erigeron canadensis ECA233G6068 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.I01334 Chr09 + View
Erythranthe guttata Migut.N01298 scaffold_14 - View
Eutrema salsugineum Thhalv10025867m.g PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10000273m.g PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED scaffold_15 - View
Fragaria x ananassa FAN20G1100 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Fvb2-3 - View
Fragaria x ananassa FAN20G0285 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2-3 + View
Fragaria x ananassa FAN15G2180 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Fvb2-4 + View
Fragaria x ananassa FAN15G1283 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2-4 + View
Fragaria x ananassa FAN27G2582 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2-1 - View
Fragaria x ananassa FAN24G3380 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Fvb2-2 - View
Fragaria vesca FvH4_2g10650 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Fvb2 + View
Fragaria vesca FvH4_2g38840 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2 - View
Gossypium hirsutum Gohir.D13G091000 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED D13 + View
Gossypium hirsutum Gohir.A13G086445 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED A13 - View
Glycine max Glyma.06G026100 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Gm06 - View
Gossypium raimondii Gorai.001G243700 Chr01 + View
Gossypium raimondii Gorai.002G124900 Chr02 - View
Hydrangea macrophylla Hma1.2p1_0032F.1_g020040 Hma1.2p1_0032F.1 - View
Hydrangea macrophylla Hma1.2p1_0773F.1_g216250 Hma1.2p1_0773F.1 + View
Lotus japonicus Lj1g0023499 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 chr1 - View
Lonicera japonica Lj5P188T33 GWHAAZE00000005 - View
Lonicera japonica Lj2C465T10 GWHAAZE00000002 + View
Lonicera japonica Lj4P793T15 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_3_73960 Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_8_127060 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Lsat_1_v8_lg_8 - View
Magnolia biondii MBI05_g39815_MAGBIO AED:0.05 Chr05 + View
Malus domestica MD08G1016400 basic pentacysteine 6 Chr08 - View
Malus domestica MD05G1054600 basic pentacysteine 4 Chr05 - View
Malus domestica MD15G1015400 basic pentacysteine 6 Chr15 - View
Manihot esculenta Manes.11G081400 Chromosome11 + View
Manihot esculenta Manes.04G082700 Chromosome04 - View
Manihot esculenta Manes.05G151500 Chromosome05 - View
Nelumbo nucifera Nn6g32267 chr6 + View
Nelumbo nucifera Nn5g29258 chr5 + View
Olea europaea Oeu027564.2 chr18 - View
Olea europaea Oeu060414.1 chr15 + View
Petunia axillaris Peaxi162Scf00016g00005 basic pentacysteine 4 Peaxi162Scf00016 - View
Punica granatum PGR031G2552 NC_045127.1 - View
Punica granatum PGR142G2865 NC_045128.1 - View
Punica granatum PGR042G0039 NC_045130.1 - View
Prunus persica Prupe.1G369400 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Pp01 - View
Prunus persica Prupe.8G082900 Pp08 - View
Papaver somniferum PSO541G6429 NC_039363.1 + View
Papaver somniferum PSO675G6971 NC_039358.1 + View
Populus trichocarpa Potri.004G163700 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Chr04 + View
Populus trichocarpa Potri.005G235900 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr05 + View
Populus trichocarpa Potri.002G026700 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr02 - View
Populus trichocarpa Potri.009G125300 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Chr09 + View
Phaseolus vulgaris Phvul.009G015000 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr09 + View
Quercus lobata QL02p010920 CM012294 + View
Quercus lobata QL11p046585 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0268351 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr6g0302391 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim06G0025500 chr06 - View
Rhododendron simsii Rhsim11G0184300 chr11 + View
Rhododendron simsii Rhsim05G0067800 chr05 - View
Striga asiatica SGA_v2.0_scaffold58G20429 scaffold58 + View
Striga asiatica SGA_v2.0_scaffold92G28271 scaffold92 - View
Salvia bowleyana SalBow3G0065 GWHASIU00000006 + View
Salix brachista Sabra04G0109900 GWHAAZH00000004 + View
Salix brachista Sabra02G0021000 GWHAAZH00000002 - View
Salix brachista Sabra09G0096300 GWHAAZH00000009 + View
Sechium edule Sed0021954 LG04 - View
Solanum lycopersicum Solyc01g110470.3 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN98_SOLTU) SL4.0ch01 + View
Solanum lycopersicum Solyc02g084230.3 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN87_SOLLC) SL4.0ch02 - View
Schrenkiella parvula Sp4g00440 PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED ch4-1 - View
Schrenkiella parvula Sp7g36930 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED ch7-6 + View
Solanum pennellii Sopen02g028970 basic pentacysteine 6 (BPC6) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: GAGA binding-like | BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 Spenn-ch02 - View
Solanum pennellii Sopen01g052600 basic pentacysteine 4 (BPC4) | CONTAINS InterPro DOMAIN/s: GAGA binding-like | BEST Arabidopsis thaliana protein match is: basic pentacysteine 5 Spenn-ch01 + View
Solanum pennellii Sopen04g034790 basic pentacysteine 6 (BPC6) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: GAGA binding-like | BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400003553 GAGA-binding transcriptional activator BBR/BPC6 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400001660 GAGA-binding transcriptional activator BBR/BPC4 ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400003719 GAGA-binding transcriptional activator BBR/BPC6 ST4.03ch04 + View
Selenicereus undatus Hund26861 Scaffold_2055 - View
Selenicereus undatus Hund17230 Scaffold_33675 + View
Selenicereus undatus Hund06288 Scaffold_33676 + View
Trochodendron aralioides TAR625G0325 group4 - View
Trochodendron aralioides TAR376G1144 group14 + View
Trochodendron aralioides TAR381G1604 group11 - View
Theobroma cacao Thecc.02G073700 GAGA-motif binding transcriptional activator Chromosome_2 - View
Theobroma cacao Thecc.08G039100 Basic pentacysteine 6 Chromosome_8 + View
Tarenaya hassleriana THA.LOC104804108 protein BASIC PENTACYSTEINE4-like NW_010971389.1 - View
Tarenaya hassleriana THA.LOC104824787 protein BASIC PENTACYSTEINE4-like NW_010966933.1 - View
Tarenaya hassleriana THA.LOC104807776 protein BASIC PENTACYSTEINE4-like NW_010963495.1 + View
Tripterygium wilfordii TWI36G0097 NC_052237.1 + View
Tripterygium wilfordii TWI75G1242 NC_052253.1 - View
Tripterygium wilfordii TWI31G0617 NC_052233.1 - View
Vaccinium macrocarpon vmacro02048 Similar to BPC4: Protein BASIC PENTACYSTEINE4 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17414 Similar to BPC4: Protein BASIC PENTACYSTEINE4 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro21708 Similar to BPC6: Protein BASIC PENTACYSTEINE6 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1951 CM024072.1 + View
Vitis vinifera GSVIVG01009844001 chr18 + View
Vitis vinifera GSVIVG01024162001 chr3 + View