Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008992 PREDICTED: transcription factor LHW-like isoform X1 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G8650 LG-5 + View
Acer truncatum Atru.chr3.3115 chr3 + View
Actinidia chinensis Actinidia35482 Lachesis_group2 - View
Actinidia chinensis Actinidia37060 Lachesis_group9 - View
Arabidopsis lyrata AL4G21140 scaffold_4 + View
Avicennia marina MSTRG.12387 ScioBoG_17730_HRSCAF_17811 - View
Aquilegia oxysepala Aqoxy1G00654 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A34414 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT2G27230 transcription factor-like protein Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. LONESOME HIGHWAY (LHW)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%3B BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3)%3B Has 448 Blast hits to 377 proteins in 66 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 446%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). LONESOME HIGHWAY (LHW)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%3B BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB06g28132 ChrB06 + View
Brassica carinata BcaB01g03059 ChrB01 + View
Brassica carinata BcaC02g08262 ChrC02 - View
Brassica napus A04p20760 A04 + View
Brassica napus C04p56590 C04 + View
Brassica rapa BraA04t17649Z A04 + View
Beta vulgaris EL10Ac7g16298 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT54G1931 NC_044375.1 + View
Cicer arietinum L. Ca_01633_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_19467_v3 Ca_LG6_v3 - View
Corylus avellana Haze_23556 Similar to LHW: Transcription factor LHW (Arabidopsis thaliana OX%3D3702) 6 - View
Citrus clementina Ciclev10029797m.g scaffold_8 + View
Carpinus fangiana Cfa010170 Cfa04 - View
Cardamine hirsuta CARHR119730 Serine/threonine-protein kinase WNK (With No Lysine)-related Chr4 + View
Capsella rubella Carub.0004s0783 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW scaffold_4 + View
Durio zibethinus Duzib150G0471 NW_019167882.1 - View
Durio zibethinus Duzib170G0301 NW_019167871.1 + View
Durio zibethinus Duzib168G0251 NW_019168159.1 - View
Eucalyptus grandis Eucgr.J00569 Chr10 - View
Erythranthe guttata Migut.D02390 scaffold_4 + View
Fragaria x ananassa FAN21G1547 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW Fvb3-2 - View
Gossypium hirsutum Gohir.A05G078200 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW A05 + View
Gossypium hirsutum Gohir.D05G081100 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW D05 + View
Gossypium hirsutum Gohir.A09G099100 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW A09 - View
Glycine max Glyma.12G094500 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW Gm12 - View
Glycine max Glyma.12G188600 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW Gm12 - View
Gossypium raimondii Gorai.009G082800 Chr09 + View
Lotus japonicus Lj3g0020476 PTHR13902//PTHR13902:SF66 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // TRANSCRIPTION FACTOR LHW chr3 + View
Lonicera japonica Lj1C267T8 GWHAAZE00000001 - View
Malus domestica MD03G1155700 transcription factor-related Chr03 - View
Malus domestica MD11G1173100 transcription factor-related Chr11 - View
Medicago truncatula Medtr4g051565 bHLH transcription factor-like protein chr4 + View
Medicago truncatula Medtr2g087295 bHLH transcription factor-like protein chr2 - View
Nelumbo nucifera Nn6g34685 chr6 + View
Nelumbo nucifera Nn2g14313 chr2 - View
Olea europaea Oeu048834.2 scaffold528 + View
Olea europaea Oeu009043.2 chr16 + View
Oryza sativa ssp. japonica Os01g0865600 Basic helix-loop-helix dimerisation region bHLH domain containing protein. chr01 + View
Oryza sativa ssp. japonica Os11g0158500 Basic helix-loop-helix dimerisation region bHLH domain containing protein. chr11 + View
Punica granatum PGR119G0843 NC_045132.1 + View
Prunus persica Prupe.6G144300 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW Pp06 - View
Papaver somniferum PSO339G6023 NC_039366.1 + View
Papaver somniferum PSO384G0929 NC_039368.1 - View
Phaseolus vulgaris Phvul.005G119400 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW Chr05 + View
Quercus lobata QL01p019775 1 + View
Salvia bowleyana SalBow3G3004 GWHASIU00000006 + View
Salvia bowleyana SalBow6G4065 GWHASIU00000002 + View
Salix brachista Sabra09G0010900 GWHAAZH00000009 - View
Simmondsia chinensis Sc21g0006800 GWHAASQ00000021 + View
Solanum lycopersicum Solyc06g074110.3 Transcription factor (AHRD V3.3 *** A0A2G2WMH3_CAPBA) SL4.0ch06 - View
Schrenkiella parvula Sp4g10040 PTHR13902:SF66 - TRANSCRIPTION FACTOR LHW ch4-6 + View
Solanum pennellii Sopen06g030530 Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. | LONESOME HIGHWAY (LHW) | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain | BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400005894 Helix-loop-helix DNA-binding ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400019624 Helix-loop-helix DNA-binding ST4.03ch11 + View
Selenicereus undatus Hund18795 Scaffold_33675 - View
Trochodendron aralioides TAR633G0790 group2 + View
Trochodendron aralioides TAR636G1405 group1 - View
Theobroma cacao Thecc.09G272600 Transcription factor-related Chromosome_9 + View
Vaccinium macrocarpon vmacro14321 Similar to LHW: Transcription factor LHW (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1059 CM024079.1 - View
Zea mays Zm00001eb407240 Zm00001e039416 Putative HLH DNA-binding domain superfamily protein 10 + View