Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0035478 PREDICTED: MATH domain-containing protein At5g43560-like isoform X1 [Prunus mume] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.2182 chr4 + View
Actinidia chinensis Actinidia04472 Lachesis_group3 - View
Arabidopsis lyrata AL1G13900 scaffold_1 - View
Aquilegia oxysepala Aqoxy5G00291 CHR05 - View
Arabidopsis thaliana AT5G43560 TRAF-like superfamily protein TRAF-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%3B BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G04300.1)%3B Has 12918 Blast hits to 9295 proteins in 852 species: Archae - 42%3B Bacteria - 1359%3B Metazoa - 4426%3B Fungi - 1772%3B Plants - 1152%3B Viruses - 72%3B Other Eukaryotes - 4095 (source: NCBI BLink). TRAF-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%3B BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G04300.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G04300 TRAF-like superfamily protein TRAF-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%2C TRAF-type (InterPro:IPR013322)%3B BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT5G43560.2)%3B Has 16577 Blast hits to 11240 proteins in 949 species: Archae - 20%3B Bacteria - 1945%3B Metazoa - 5204%3B Fungi - 2178%3B Plants - 1117%3B Viruses - 112%3B Other Eukaryotes - 6001 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC06g31689 ChrC06 - View
Brassica napus A10p02700 A10 - View
Brassica napus C05p02490 C05 - View
Brassica oleracea BolC5t29028H C5 - View
Brassica rapa BraA10t42539Z A10 - View
Beta vulgaris EL10Ac3g05897 PF00917 - MATH domain (MATH) Chr3_EL10_PGA_scaffold7 - View
Corylus avellana Haze_11315 Similar to TRAF1A: TNF receptor-associated factor homolog 1a (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g04990 Putative MATH domain-containing protein At5g43560 chr3 - View
Citrus clementina Ciclev10004192m.g scaffold_9 + View
Cardamine hirsuta CARHR003630 MATH domain-containing protein Chr1 - View
Cardamine hirsuta CARHR180040 Ubiquitin carboxyl-terminal hydrolase Chr6 - View
Carya illinoinensis CiPaw.02G115800 PF00917 - MATH domain (MATH) Chr02 + View
Carya illinoinensis CiPaw.01G189300 PF00917 - MATH domain (MATH) Chr01 + View
Citrullus lanatus ClCG05G004530 MATH domain-containing protein CG_Chr05 + View
Cucumis melo MELO3C006460.2 TRAF-like superfamily protein chr06 + View
Carica papaya Cpa.g.sc44.110 supercontig_44 + View
Chenopodium quinoa AUR62015466 At5g43560: MATH domain-containing protein At5g43560 C_Quinoa_Scaffold_2751 - View
Capsella rubella Carub.0001s0349 KOG3584 - cAMP response element binding protein and related transcription factors scaffold_1 - View
Cucumis sativus L. CsaV3_3G012500 MATH domain-containing protein chr3 + View
Daucus carota DCAR_002340 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_027286 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv44647 GWHABJS00000014 + View
Davidia involucrata Dinv29900 GWHABJS00000016 + View
Durio zibethinus Duzib212G0982 NW_019168026.1 + View
Erigeron canadensis ECA233G3249 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA240G2732 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.H03150 Chr08 + View
Eutrema salsugineum Thhalv10006644m.g PF00917 - MATH domain (MATH) scaffold_5 + View
Fragaria x ananassa FAN17G0240 PF00917 - MATH domain (MATH) Fvb4-2 - View
Fragaria x ananassa FAN22G0018 PF00917 - MATH domain (MATH) Fvb4-1 - View
Fragaria x ananassa FAN12G0222 PF00917 - MATH domain (MATH) Fvb4-3 + View
Gossypium hirsutum Gohir.D09G225700 PF00917 - MATH domain (MATH) D09 - View
Gossypium hirsutum Gohir.D02G043000 PF00917 - MATH domain (MATH) D02 + View
Gossypium hirsutum Gohir.A10G113500 PF00917 - MATH domain (MATH) A10 + View
Gossypium hirsutum Gohir.A09G223700 PF00917 - MATH domain (MATH) A09 - View
Gossypium hirsutum Gohir.A02G036400 PF00917 - MATH domain (MATH) A02 + View
Glycine max Glyma.10G188600 PF00917 - MATH domain (MATH) Gm10 + View
Glycine max Glyma.20G086700 PF00917 - MATH domain (MATH) Gm20 + View
Glycine max Glyma.10G008700 PF00917 - MATH domain (MATH) Gm10 - View
Gossypium raimondii Gorai.011G171900 Chr11 - View
Gossypium raimondii Gorai.005G047400 Chr05 + View
Gossypium raimondii Gorai.006G247200 Chr06 - View
Helianthus annuus HanXRQChr03g0092321 Putative TRAF-like HanXRQChr03 + View
Hydrangea macrophylla Hma1.2p1_0650F.1_g195580 Hma1.2p1_0650F.1 - View
Lupinus albus Lalb_Chr03g0037041 PF00917 - MATH domain (MATH) Lalb_Chr03 - View
Lotus japonicus Lj5g0007272 PF00917 - MATH domain (MATH) chr5 + View
Lotus japonicus Lj6g0016969 PF00917 - MATH domain (MATH) chr6 + View
Lonicera japonica Lj6C657T15 GWHAAZE00000006 - View
Lonicera japonica Lj3A795G23 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_3_122660 PTHR24007 - BRCA1-ASSOCIATED PROTEIN Lsat_1_v8_lg_3 - View
Malus domestica MD16G1211000 TRAF-like superfamily protein Chr16 - View
Malus domestica MD13G1209100 TRAF-like superfamily protein Chr13 - View
Manihot esculenta Manes.03G168200 Chromosome03 + View
Manihot esculenta Manes.15G037500 Chromosome15 - View
Medicago truncatula Medtr1g044450 meprin and TRAF (MATH)-like domain protein chr1 + View
Nelumbo nucifera Nn3g19583 chr3 - View
Olea europaea Oeu021414.1 scaffold1933 - View
Petunia axillaris Peaxi162Scf00024g00053 TRAF-like superfamily protein Peaxi162Scf00024 - View
Punica granatum PGR004G2419 NC_045131.1 - View
Pisum sativum Psat6g132600 MATH domain chr6LG2 - View
Papaver somniferum PSO210G1885 NC_039359.1 + View
Populus trichocarpa Potri.008G163300 PF00917 - MATH domain (MATH) Chr08 - View
Populus trichocarpa Potri.010G075000 PF00917 - MATH domain (MATH) Chr10 + View
Phaseolus vulgaris Phvul.007G271500 PF00917 - MATH domain (MATH) Chr07 + View
Quercus lobata QL06p015924 6 - View
Salvia bowleyana SalBow2G1285 GWHASIU00000007 + View
Salix brachista Sabra10G0033800 GWHAAZH00000010 - View
Sechium edule Sed0005071 LG12 - View
Sechium edule Sed0000078 LG02 - View
Solanum lycopersicum Solyc09g089560.4 MATH domain-containing protein (AHRD V3.3 *-* A0A1Q3BTU7_CEPFO) SL4.0ch09 - View
Solanum lycopersicum Solyc06g053740.4 MATH domain-containing protein (AHRD V3.3 *-* A0A1Q3BTU7_CEPFO) SL4.0ch06 + View
Solanum lycopersicum Solyc03g005430.4 MATH domain-containing protein (AHRD V3.3 *** A0A1Q3BTU7_CEPFO) SL4.0ch03 - View
Schrenkiella parvula Sp1g03110 PF00917 - MATH domain (MATH) ch1-1 - View
Solanum pennellii Sopen06g018850 TRAF-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH | BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen09g032480 TRAF-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH | BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein . Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG402016322 MATH domain-containing protein ST4.03ch06 + View
Selenicereus undatus Hund11858 Scaffold_33679 - View
Trochodendron aralioides TAR362G0167 group17 - View
Trochodendron aralioides TAR633G1794 group2 + View
Trochodendron aralioides TAR365G0712 group16 + View
Theobroma cacao Thecc.04G247700 TRAF-like superfamily protein Chromosome_4 - View
Trifolium pratense TPR.G26447 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI73G0813 NC_052232.1 - View
Tripterygium wilfordii TWI09G1092 NC_052245.1 + View
Vaccinium macrocarpon vmacro08439 Similar to TRAF1B: TNF receptor-associated factor homolog 1b (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G3056 CM024071.1 - View
Vitis vinifera GSVIVG01018133001 chr5 + View