Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031013 PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X1 [Vitis vinifera] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Anthoceros agrestis AagrBONN_evm.TU.Sc2ySwM_368.1169 Sc2ySwM_368 + View
Acer truncatum Atru.chr13.1638 chr13 + View
Actinidia chinensis Actinidia10681 Lachesis_group28 + View
Actinidia chinensis Actinidia36452 Lachesis_group4 + View
Arabidopsis lyrata AL1G52080 scaffold_1 - View
Arabidopsis lyrata AL2G37180 scaffold_2 + View
Avicennia marina MSTRG.1393 ScioBoG_102833_HRSCAF_103052 - View
Amaranthus hybridus Ah.05g169590 AmaHy_arrow1_Scaffold_5 + View
Amaranthus hybridus Ah.03g146150 Pentatricopeptide repeat-containing protein ELI1, chloroplastic (Protein EDITING LACKING INSERTIONAL MUTANT 1) AmaHy_arrow1_Scaffold_3 - View
Aquilegia oxysepala Aqoxy6G00368 CHR06 + View
Arabidopsis thaliana AT1G43980 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 35490 Blast hits to 12305 proteins in 148 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 8%3B Fungi - 8%3B Plants - 35171%3B Viruses - 0%3B Other Eukaryotes - 303 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR1136G125 AmTr_v1.0_scaffold00071 - View
Brassica carinata BcaB02g07091 ChrB02 + View
Brassica napus C06p31560 C06 - View
Brassica napus A07p28140 A07 - View
Brassica oleracea BolC6t38285H C6 - View
Beta vulgaris EL10Ac1g01405 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr1_EL10_PGA_scaffold3 + View
Cicer arietinum L. Ca_16631_v3 Ca_LG5_v3 + View
Corylus avellana Haze_25268 Similar to PCMP-E76: Pentatricopeptide repeat-containing protein At2g13600 (Arabidopsis thaliana OX%3D3702) 8 - View
Corylus avellana Haze_17667 Similar to PCMP-A5: Pentatricopeptide repeat-containing protein At3g26540 (Arabidopsis thaliana OX%3D3702) 7 + View
Citrus clementina Ciclev10000445m.g scaffold_5 + View
Citrus clementina Ciclev10000448m.g scaffold_5 + View
Cardamine hirsuta CARHR070520 Pentatricopeptide repeat-containing protein Chr2 + View
Carya illinoinensis CiPaw.03G120000 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr03 - View
Citrullus lanatus ClCG08G006260 Pentatricopeptide repeat-containing protein, putative CG_Chr08 + View
Carica papaya Cpa.g.sc51.100 supercontig_51 - View
Carica papaya Cpa.g.sc42.171 supercontig_42 - View
Carica papaya Cpa.g.sc26.67 supercontig_26 - View
Chenopodium quinoa AUR62013460 PCMP-A5: Pentatricopeptide repeat-containing protein At3g26540 C_Quinoa_Scaffold_1611 + View
Chenopodium quinoa AUR62007676 PCMP-A5: Pentatricopeptide repeat-containing protein At3g26540 C_Quinoa_Scaffold_2646 - View
Cucumis sativus L. CsaV3_6G031160 Pentatricopeptide repeat chr6 - View
Daucus carota DCAR_001204 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv41150 GWHABJS00000002 + View
Davidia involucrata Dinv25774 GWHABJS00000011 + View
Durio zibethinus Duzib041G0254 NW_019167826.1 + View
Durio zibethinus Duzib116G0034 NW_019167949.1 + View
Durio zibethinus Duzib093G0079 NW_019167937.1 - View
Erigeron canadensis ECA232G1534 Conyza_canadensis_scaffold:2 - View
Erythranthe guttata Migut.C01088 scaffold_3 + View
Fragaria x ananassa FAN24G3190 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-2 + View
Fragaria x ananassa FAN27G1097 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Fvb2-1 - View
Fragaria x ananassa FAN24G1158 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2-2 + View
Fragaria x ananassa FAN20G3197 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2-3 + View
Fragaria x ananassa FAN15G2580 PF01535 - PPR repeat (PPR) Fvb2-4 - View
Fragaria vesca FvH4_2g15270 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2 - View
Fragaria vesca FvH4_1g22400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1 - View
Gossypium hirsutum Gohir.D03G062400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D03 + View
Gossypium hirsutum Gohir.A02G069100 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A02 - View
Gossypium hirsutum Gohir.D02G075800 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D02 - View
Glycine max Glyma.06G154600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 + View
Glycine max Glyma.04G243200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm04 - View
Glycine max Glyma.06G119900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 + View
Gossypium raimondii Gorai.005G085100 Chr05 - View
Helianthus annuus HanXRQChr04g0109461 Putative pentatricopeptide repeat HanXRQChr04 + View
Hydrangea macrophylla Hma1.2p1_0642F.1_g194340 Hma1.2p1_0642F.1 + View
Lupinus albus Lalb_Chr08g0240921 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lalb_Chr08 - View
Lupinus albus Lalb_Chr11g0066291 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lalb_Chr11 + View
Lotus japonicus Lj1g0020180 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr1 - View
Lotus japonicus Lj1g0024075 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) chr1 - View
Lonicera japonica Lj7C356T9 GWHAAZE00000007 + View
Lonicera japonica Lj4C686T10 GWHAAZE00000004 - View
Malus domestica MD10G1008400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr10 + View
Manihot esculenta Manes.18G084800 Chromosome18 + View
Manihot esculenta Manes.02G174200 Chromosome02 + View
Medicago truncatula Medtr3g096420 PPR containing plant-like protein chr3 - View
Medicago truncatula Medtr3g088820 PPR containing plant-like protein chr3 + View
Nelumbo nucifera Nn5g28501 chr5 + View
Nicotiana tabacum Nitab4.5_0000174g0010 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000174 + View
Punica granatum PGR042G1119 NC_045130.1 + View
Prunus persica Prupe.8G012400 Pp08 + View
Pisum sativum Psat5g082760 PPR repeat family chr5LG3 + View
Papaver somniferum PSO017G1752 NC_039362.1 + View
Populus trichocarpa Potri.005G185300 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr05 + View
Populus trichocarpa Potri.007G104700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr07 + View
Populus trichocarpa Potri.002G072500 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr02 - View
Phaseolus vulgaris Phvul.009G132500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 + View
Quercus lobata QL09p029648 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0277991 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0014900 chr11 + View
Rhododendron simsii Rhsim11G0074500 chr11 + View
Striga asiatica SGA_v2.0_scaffold19G08696 scaffold19 - View
Salvia bowleyana SalBow7G2218 GWHASIU00000005 + View
Salix brachista Sabra07G0085700 GWHAAZH00000007 + View
Salix brachista Sabra05G0141600 GWHAAZH00000005 + View
Sechium edule Sed0003350 LG03 + View
Sechium edule Sed0009758 LG01 + View
Sapria himalayana SHI11671 scaffold12_13443846 + View
Schrenkiella parvula Sp5g32150 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch5-7 + View
Schrenkiella parvula Sp1g33310 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch1-2 - View
Solanum pennellii Sopen04g026190 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400037332 Cell division protein ftsH ST4.03ch04 + View
Trochodendron aralioides TAR625G1252 group4 + View
Theobroma cacao Thecc.08G143000 Chromosome_8 - View
Theobroma cacao Thecc.08G137500 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_8 + View
Theobroma cacao Thecc.01G134600 Uncharacterized protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104812057 putative pentatricopeptide repeat-containing protein At1g77010%2C mitochondrial isoform X2 NW_010965372.1 + View
Trifolium pratense TPR.G6328 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI34G0885 NC_052235.1 + View
Vigna mungo VMungo1309G1300 CM024072.1 + View
Vitis vinifera GSVIVG01009976001 chr18 + View