Gene: AT1G43980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G43980
  • Transcript Identifier AT1G43980.1
  • Gene Type Coding gene
  • Location Chr1 : 16687637-16689538 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G43980.1
  • uniprot Q9LP03

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 35490 Blast hits to 12305 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 8; Plants - 35171; Viruses - 0; Other Eukaryotes - 303 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
IBA
GOA DatabaseRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0043231
IBA
GOA Databaseintracellular membrane-bounded organelle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated