Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0035890 PREDICTED: granule-bound starch synthase 2, chloroplastic/amyloplastic isoform X2 [Vitis vinifera] Chr2 - View
CSS0036692 PREDICTED: granule-bound starch synthase 2, chloroplastic/amyloplastic isoform X1 [Vitis vinifera] Contig780 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G12440 LG-5 + View
Acer truncatum Atru.chr8.178 chr8 + View
Actinidia chinensis Actinidia38766 Lachesis_group4 + View
Actinidia chinensis Actinidia38784 Contig02207_ERROPOS181165+ + View
Arabidopsis lyrata AL3G11070 scaffold_3 + View
Amaranthus hybridus Ah.10g031590 Starch synthase 2, chloroplastic/amyloplastic (AtSS2) (EC 2.4.1.21) (Soluble starch synthase II) AmaHy_arrow1_Scaffold_10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9G3TAM K00703 - starch synthase (E2.4.1.21, glgA) arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT3G01180 starch synthase 2 starch synthase 2 (SS2)%3B FUNCTIONS IN: transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: cellulose biosynthetic process%2C glucan biosynthetic process%2C biosynthetic process%2C glycogen biosynthetic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases%2C ADP-glucose type (InterPro:IPR011835)%2C Starch synthase%2C catalytic domain (InterPro:IPR013534)%2C Glycosyl transferase%2C group 1 (InterPro:IPR001296)%3B BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases%2C ADP-glucose type (TAIR:AT5G24300.2)%3B Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233%3B Bacteria - 4788%3B Metazoa - 1175%3B Fungi - 1070%3B Plants - 4691%3B Viruses - 26%3B Other Eukaryotes - 3944 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0564G338 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaC05g30392 ChrC05 - View
Brassica carinata BcaC09g47673 ChrC09 + View
Brassica napus BNapus_Darmor_BZH_scaffold_97p00120 BNapus_Darmor_BZH_scaffold_97 - View
Brassica napus C09p75370 C09 + View
Brassica oleracea BolC1t05933H C1 - View
Brassica oleracea BolC5t35123H C5 - View
Brassica rapa BraA01t04641Z A01 - View
Beta vulgaris EL10Ac2g02984 K00703 - starch synthase (E2.4.1.21, glgA) Chr2_EL10_PGA_scaffold6 - View
Capsicum annuum CAN.G206.155 PGAv.1.6.scaffold206 + View
Cannabis sativa CANSAT64G2318 NC_044379.1 + View
Cicer arietinum L. Ca_04285_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_02910_v3 Ca_LG1_v3 - View
Corylus avellana Haze_14520 Similar to SS2: Granule-bound starch synthase 2, chloroplastic/amyloplastic (Solanum tuberosum OX%3D4113) 5 + View
Coffea canephora Cc07_g03430 Granule-bound starch synthase 2, chloroplastic/amyloplastic chr7 + View
Citrus clementina Ciclev10011124m.g scaffold_6 + View
Carpinus fangiana Cfa007563 Cfa03 - View
Cardamine hirsuta CARHR075860 Glycogen synthase 2 Chr3 + View
Carya illinoinensis CiPaw.03G025800 K00703 - starch synthase (E2.4.1.21, glgA) Chr03 + View
Carya illinoinensis CiPaw.04G016900 K00703 - starch synthase (E2.4.1.21, glgA) Chr04 + View
Citrullus lanatus ClCG10G015190 Glycogen synthase family protein CG_Chr10 + View
Cucumis melo MELO3C009861.2 Starch synthase, chloroplastic/amyloplastic chr04 + View
Chenopodium quinoa AUR62034405 SS2: Granule-bound starch synthase 2, chloroplastic/amyloplastic C_Quinoa_Scaffold_2742 - View
Capsella rubella Carub.0003s0097 PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC scaffold_3 + View
Cucumis sativus L. CsaV3_3G041330 Starch synthase, chloroplastic/amyloplastic chr3 - View
Davidia involucrata Dinv33768 GWHABJS00000014 + View
Durio zibethinus Duzib147G1357 NW_019168470.1 - View
Durio zibethinus Duzib264G1115 NW_019167960.1 + View
Erigeron canadensis ECA232G4228 Conyza_canadensis_scaffold:2 - View
Eutrema salsugineum Thhalv10020091m.g PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC scaffold_13 - View
Fragaria x ananassa FAN14G5629 K00703 - starch synthase (E2.4.1.21, glgA) Fvb6-1 + View
Fragaria x ananassa FAN02G2319 K00703 - starch synthase (E2.4.1.21, glgA) Fvb6-4 + View
Fragaria vesca FvH4_6g48410 PTHR12526//PTHR12526:SF337 - GLYCOSYLTRANSFERASE // STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC Fvb6 - View
Gossypium hirsutum Gohir.A09G015500 PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC A09 - View
Gossypium hirsutum Gohir.A07G205600 K00703 - starch synthase (E2.4.1.21, glgA) A07 + View
Glycine max Glyma.13G062700 K00703 - starch synthase (E2.4.1.21, glgA) Gm13 - View
Glycine max Glyma.18G260101 PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC Gm18 + View
Gossypium raimondii Gorai.010G135300 Chr10 + View
Lotus japonicus Lj1g0028208 K00703 - starch synthase (E2.4.1.21, glgA) chr1 + View
Lotus japonicus Lj2g0016593 K00703 - starch synthase (E2.4.1.21, glgA) chr2 - View
Malus domestica MD09G1052000 starch synthase 2 Chr09 + View
Manihot esculenta Manes.02G046733 Chromosome02 + View
Medicago truncatula Medtr6g012380 granule bound starch synthase chr6 + View
Nelumbo nucifera Nn3g17255 chr3 + View
Petunia axillaris Peaxi162Scf00129g00129 monodehydroascorbate reductase 4 Peaxi162Scf00129 - View
Punica granatum PGR004G2567 NC_045131.1 - View
Prunus persica Prupe.3G266700 K00703 - starch synthase (E2.4.1.21, glgA) Pp03 - View
Populus trichocarpa Potri.017G084100 PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC Chr17 - View
Phaseolus vulgaris Phvul.008G036600 Chr08 + View
Rosa chinensis RcHm_v2.0_Chr2g0168331 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0070300 chr08 - View
Salix brachista Sabra17G0074200 GWHAAZH00000017 - View
Sechium edule Sed0000175 LG08 + View
Solanum lycopersicum Solyc02g088000.3 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** K4BBV6_SOLLC) SL4.0ch02 + View
Schrenkiella parvula Sp3g00920 PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC ch3-1 + View
Solanum pennellii Sopen02g032740 Granule-bound starch synthase 2, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase II) (SS II) (GBSS-II) - Solanum tuberosum (Potato), starch synthase 2 (SS2) | FUNCTIONS IN: transferase activity, transferring glycosyl groups | INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type , Starch synthase, catalytic domain , Glycosyl transferase, group 1 | BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400001328 Granule-bound starch synthase 2, chloroplastic/amyloplastic ST4.03ch02 - View
Selenicereus undatus Hund15597 Scaffold_33677 + View
Trochodendron aralioides TAR622G0870 group8 - View
Theobroma cacao Thecc.04G083100 Starch synthase 2 Chromosome_4 - View
Vaccinium macrocarpon vmacro18187 Similar to SS2: Granule-bound starch synthase 2, chloroplastic/amyloplastic (Solanum tuberosum OX%3D4113) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0284 CM024070.1 - View