Gene: AT3G01180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G01180
  • Transcript Identifier AT3G01180.1
  • Gene Type Coding gene
  • Location Chr3 : 62456-65678 : negative

Gene Family Information

  • ID HOM05D000513
  • #Genes/#Species 1048/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G01180.1
  • symbol SS2
  • Alias AtSS2,starch synthase 2
  • uniprot Q9MAC8

Descriptions

  • Description starch synthase 2
  • Computational description starch synthase 2 (SS2); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type (TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233; Bacteria - 4788; Metazoa - 1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other Eukaryotes - 3944 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010021
IMP
Gene Ontologyamylopectin biosynthetic process1
GO:0019252
IEA
Gene Ontologystarch biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016757
ISS
Gene Ontologyglycosyltransferase activity
GO:0016757
IEA
InterProglycosyltransferase activity
GO:0004373
IEA
Gene Ontologyglycogen (starch) synthase activity
GO:0004373
IEA
InterProglycogen (starch) synthase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0009011
IEA
GOA Databasestarch synthase activity
GO:0009011
IMP
Gene Ontologystarch synthase activity1
GO:0033201
IEA
Gene Ontologyalpha-1,4-glucan synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
HDA
Gene Ontologyplasmodesma2
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0009501
IEA
GOA Databaseamyloplast
GO:0005794
HDA
Gene OntologyGolgi apparatus4
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0000325
HDA
Gene Ontologyplant-type vacuole6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011835 Bacterial/plant glycogen synthase
IPR013534 Starch synthase, catalytic domain
IPR001296 Glycosyl transferase, family 1
Mapman id Description
3.2.2.4.2 Carbohydrate metabolism.starch metabolism.biosynthesis.starch synthase activities.starch synthase (SSII)