Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G9610 LG-9 - View
Acer truncatum Atru.chr10.2164 chr10 - View
Actinidia chinensis Actinidia26938 Lachesis_group0 + View
Actinidia chinensis Actinidia05528 Lachesis_group20 + View
Arabidopsis lyrata AL6G48390 scaffold_6 + View
Amaranthus hybridus Ah.09g235170 AmaHy_arrow1_Scaffold_9 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.62P0D6 PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT4G04885 PCF11P-similar protein 4 Encodes PCFS4 (Pcf11p-similar protein 4)%2C a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time. PCF11P-similar protein 4 (PCFS4)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: positive regulation of flower development%2C mRNA polyadenylation%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: shoot apical meristem%2C sepal%2C gynoecium%2C stamen%2C leaf%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903)%2C RNA polymerase II%2C large subunit%2C CTD (InterPro:IPR006569)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%2C ENTH/VHS (InterPro:IPR008942)%3B BEST Arabidopsis thaliana protein match is: Pre-mRNA cleavage complex II (TAIR:AT1G66500.1)%3B Has 656 Blast hits to 406 proteins in 169 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 208%3B Fungi - 279%3B Plants - 120%3B Viruses - 0%3B Other Eukaryotes - 49 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0752G038 AmTr_v1.0_scaffold00062 - View
Brassica carinata BcaC04g21335 ChrC04 + View
Brassica carinata BcaB01g01843 ChrB01 + View
Brassica napus C09p33040 C09 - View
Brassica napus A09p26040 A09 - View
Brassica oleracea BolC9t56139H C9 - View
Brassica rapa BraA09t38170Z A09 - View
Beta vulgaris EL10Ac8g20009 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Chr8_EL10_PGA_scaffold4 - View
Corylus avellana Haze_06757 Similar to PCFS4: Polyadenylation and cleavage factor homolog 4 (Arabidopsis thaliana OX%3D3702) 2 - View
Citrus clementina Ciclev10014158m.g scaffold_2 + View
Ceratophyllum demersum CDE02G0957 1 + View
Carpinus fangiana Cfa000259 Cfa01 + View
Cardamine hirsuta CARHR252670 mRNA cleavage factor complex component Pcf11 Chr8 - View
Carya illinoinensis CiPaw.10G069000 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Chr10 - View
Carya illinoinensis CiPaw.09G088600 PTHR15921//PTHR15921:SF4 - PRE-MRNA CLEAVAGE COMPLEX II // PCF11P-SIMILAR PROTEIN 4 Chr09 - View
Carica papaya Cpa.g.sc198.19 supercontig_198 - View
Chenopodium quinoa AUR62021990 PCFS4: Polyadenylation and cleavage factor homolog 4 C_Quinoa_Scaffold_1862 + View
Chenopodium quinoa AUR62012664 PCFS4: Polyadenylation and cleavage factor homolog 4 C_Quinoa_Scaffold_2715 - View
Capsella rubella Carub.0006s3280 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) scaffold_6 + View
Davidia involucrata Dinv20029 GWHABJS00000020 - View
Durio zibethinus Duzib160G0395 NW_019168015.1 - View
Durio zibethinus Duzib192G0636 NW_019168037.1 + View
Durio zibethinus Duzib235G1035 NW_019167982.1 - View
Erigeron canadensis ECA236G1956 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.D01301 Chr04 - View
Eutrema salsugineum Thhalv10028426m.g K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) scaffold_3 - View
Fragaria x ananassa FAN25G1704 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Fvb3-1 - View
Fragaria x ananassa FAN21G2529 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Fvb3-2 - View
Fragaria vesca FvH4_3g02510 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Fvb3 + View
Gossypium hirsutum Gohir.A06G146700 PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 A06 - View
Gossypium hirsutum Gohir.D06G152500 PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 D06 - View
Gossypium raimondii Gorai.010G178200 Chr10 - View
Helianthus annuus HanXRQChr05g0129881 Probable PCF11P-similar protein 4 HanXRQChr05 + View
Hydrangea macrophylla Hma1.2p1_0813F.1_g222550 Hma1.2p1_0813F.1 - View
Lotus japonicus Lj1g0009790 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) chr1 + View
Lonicera japonica Lj2A271G35 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_7_17321 PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 Lsat_1_v8_lg_7 + View
Magnolia biondii MBI02_g15270_MAGBIO AED:0.12 Chr02 - View
Malus domestica MD05G1342300 PCF11P-similar protein 4 Chr05 - View
Manihot esculenta Manes.17G036600 Chromosome17 + View
Nelumbo nucifera Nn1g07073 chr1 - View
Nelumbo nucifera Nn1g03599 chr1 + View
Olea europaea Oeu002726.2 chr10 + View
Oryza sativa ssp. japonica Os08g0187700 ENTH/VHS domain containing protein. chr08 - View
Prunus persica Prupe.4G024700 PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 Pp04 + View
Papaver somniferum PSO832G3539 NC_039367.1 - View
Populus trichocarpa Potri.004G020300 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Chr04 + View
Populus trichocarpa Potri.011G024800 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Chr11 + View
Phaseolus vulgaris Phvul.007G053300 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Chr07 - View
Quercus lobata QL05p074614 5 + View
Rosa chinensis RcHm_v2.0_Chr5g0003821 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0156600 chr13 + View
Simmondsia chinensis Sc17g0007200 GWHAASQ00000017 - View
Sechium edule Sed0013587 LG08 - View
Sechium edule Sed0026699 LG01 - View
Schrenkiella parvula Sp6g04080 K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) ch6-1 - View
Selenicereus undatus Hund21383 Scaffold_33680 - View
Trochodendron aralioides TAR627G0851 group6 - View
Trochodendron aralioides TAR626G1780 group3 + View
Theobroma cacao Thecc.06G216100 PCF11P-similar protein 4 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104812944 polyadenylation and cleavage factor homolog 4 isoform X1 NW_010960187.1 - View
Tripterygium wilfordii TWI63G1360 NC_052240.1 + View
Vaccinium macrocarpon vmacro03698 Similar to PCFS4: Polyadenylation and cleavage factor homolog 4 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View